Click here to switch to the map view.

The map label for this gene is ssuA [C]

Identifier: 71905723

GI number: 71905723

Start: 98595

End: 99593

Strand: Reverse

Name: ssuA [C]

Synonym: Daro_0081

Alternate gene names: 71905723

Gene position: 99593-98595 (Counterclockwise)

Preceding gene: 71905724

Following gene: 71905722

Centisome position: 2.21

GC content: 60.56

Gene sequence:

>999_bases
ATGAACACCCTCAAGTCCGCAAGTCGTACCCGGCGCTGGCTAACCCGACTGGTCCTACCCGTCGCTGCTGCCTTCAGCCT
CACCGCCCAGGCGGCCCAACCCCTGAAAATTGGCTATAGCGACTGGCCGGGCTGGGTGGCCTGGCAGGTTGCCATCGACA
AAGGCTGGTTCAAGGAAGCGGGCGTCGATGTCAAATTTGAGTGGTTCGACTATTCGGCCTCGATGGATGCCTTCGCCGCC
GGGAAGATCGACGCCGTGACGATGACCAATGGCGACGCACTGGTGACTGGCGCTGGTGGTGCCAAGAGCGTGATGCTGAT
GCTGACCGACTACTCCAACGGCAACGACATGATCGTCGCCAAACCGGGCATCAAGTCGATCAAGGATCTCAAGGGCAAGA
AGGTCGCCGTCGAGCAAGGTCTGGTCGAACACCTGCTGCTGCTCAATGGTCTGAAGAAGGCCGGCATGAAGGAATCGGAC
GTCACGCTGGTCAACGCCAAGACCAACGAAATGCCCCAGATGCTGACCGCCAAGGACATCGCCGCCATCGGCGCCTGGCA
ACCGGTATCCGGTGAGGCCATGAAGGCTGTACCGGGTTCGAAGCCGATCTATACCTCGGCCGACGAAGCCGGCCTGATTT
ACGACGTGCTCGCCGCCAACCCGGCCAGCGTCAAGGCCCGCCGCGCCGACTGGCAGAAGGTGGTCAAGGTTTGGGACAAG
GTTGTCGCCTATATCGAGGACCCGAAAACCCAGCCCGACGCCGTGAAGATCATGGCCGCCCGCTCCGGCATCAGCCCGGT
CGAGTACCTGCCGCTGCTCAAGGGCACCAAGCTGCTCTCCCTGGAAGAAGGCAAGAAGATCTACGTCAAGGGCGATGGCT
TCAAGACGCTCTACGGCTCGACCAAGATCGTCGACTCGTTCAACGTGGCCAACCAGGTTTACAAGGCCCCGGAGAAGATC
GACGGCTATCTGGATTCCTCCTTCACCAACGGCAAATAA

Upstream 100 bases:

>100_bases
CTAGACAGAACCTAACCACTGGCACCAATCATGCTCAGTAAAAAGCGGCAGTATTACTCAATGGAAATTTCGTAATACCA
AACTTTGACAGGAGCTCATG

Downstream 100 bases:

>100_bases
GCCGGCATCCATCACCAGGACGGCACAGCAATGAGCGCTCCCACCCTCTGGCTTAATGCTCCACAACGACGACGGGCGTT
GCTGACAGTGGGTTCATTCC

Product: ABC transport system substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNTLKSASRTRRWLTRLVLPVAAAFSLTAQAAQPLKIGYSDWPGWVAWQVAIDKGWFKEAGVDVKFEWFDYSASMDAFAA
GKIDAVTMTNGDALVTGAGGAKSVMLMLTDYSNGNDMIVAKPGIKSIKDLKGKKVAVEQGLVEHLLLLNGLKKAGMKESD
VTLVNAKTNEMPQMLTAKDIAAIGAWQPVSGEAMKAVPGSKPIYTSADEAGLIYDVLAANPASVKARRADWQKVVKVWDK
VVAYIEDPKTQPDAVKIMAARSGISPVEYLPLLKGTKLLSLEEGKKIYVKGDGFKTLYGSTKIVDSFNVANQVYKAPEKI
DGYLDSSFTNGK

Sequences:

>Translated_332_residues
MNTLKSASRTRRWLTRLVLPVAAAFSLTAQAAQPLKIGYSDWPGWVAWQVAIDKGWFKEAGVDVKFEWFDYSASMDAFAA
GKIDAVTMTNGDALVTGAGGAKSVMLMLTDYSNGNDMIVAKPGIKSIKDLKGKKVAVEQGLVEHLLLLNGLKKAGMKESD
VTLVNAKTNEMPQMLTAKDIAAIGAWQPVSGEAMKAVPGSKPIYTSADEAGLIYDVLAANPASVKARRADWQKVVKVWDK
VVAYIEDPKTQPDAVKIMAARSGISPVEYLPLLKGTKLLSLEEGKKIYVKGDGFKTLYGSTKIVDSFNVANQVYKAPEKI
DGYLDSSFTNGK
>Mature_332_residues
MNTLKSASRTRRWLTRLVLPVAAAFSLTAQAAQPLKIGYSDWPGWVAWQVAIDKGWFKEAGVDVKFEWFDYSASMDAFAA
GKIDAVTMTNGDALVTGAGGAKSVMLMLTDYSNGNDMIVAKPGIKSIKDLKGKKVAVEQGLVEHLLLLNGLKKAGMKESD
VTLVNAKTNEMPQMLTAKDIAAIGAWQPVSGEAMKAVPGSKPIYTSADEAGLIYDVLAANPASVKARRADWQKVVKVWDK
VVAYIEDPKTQPDAVKIMAARSGISPVEYLPLLKGTKLLSLEEGKKIYVKGDGFKTLYGSTKIVDSFNVANQVYKAPEKI
DGYLDSSFTNGK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35888; Mature: 35888

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLKSASRTRRWLTRLVLPVAAAFSLTAQAAQPLKIGYSDWPGWVAWQVAIDKGWFKEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCCHHHC
GVDVKFEWFDYSASMDAFAAGKIDAVTMTNGDALVTGAGGAKSVMLMLTDYSNGNDMIVA
CCCEEEEEEECCCCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEEE
KPGIKSIKDLKGKKVAVEQGLVEHLLLLNGLKKAGMKESDVTLVNAKTNEMPQMLTAKDI
CCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH
AAIGAWQPVSGEAMKAVPGSKPIYTSADEAGLIYDVLAANPASVKARRADWQKVVKVWDK
HHHCCCCCCCCCHHCCCCCCCCEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHH
VVAYIEDPKTQPDAVKIMAARSGISPVEYLPLLKGTKLLSLEEGKKIYVKGDGFKTLYGS
HHHHHCCCCCCCCCEEEEEHHCCCCHHHHHHHCCCCEEEEECCCCEEEEECCCEEEECCC
TKIVDSFNVANQVYKAPEKIDGYLDSSFTNGK
EEEEEHHHHHHHHHHCHHHHCCHHCCCCCCCC
>Mature Secondary Structure
MNTLKSASRTRRWLTRLVLPVAAAFSLTAQAAQPLKIGYSDWPGWVAWQVAIDKGWFKEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCCHHHC
GVDVKFEWFDYSASMDAFAAGKIDAVTMTNGDALVTGAGGAKSVMLMLTDYSNGNDMIVA
CCCEEEEEEECCCCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEEE
KPGIKSIKDLKGKKVAVEQGLVEHLLLLNGLKKAGMKESDVTLVNAKTNEMPQMLTAKDI
CCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH
AAIGAWQPVSGEAMKAVPGSKPIYTSADEAGLIYDVLAANPASVKARRADWQKVVKVWDK
HHHCCCCCCCCCHHCCCCCCCCEEECCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHH
VVAYIEDPKTQPDAVKIMAARSGISPVEYLPLLKGTKLLSLEEGKKIYVKGDGFKTLYGS
HHHHHCCCCCCCCCEEEEEHHCCCCHHHHHHHCCCCEEEEECCCCEEEEECCCEEEECCC
TKIVDSFNVANQVYKAPEKIDGYLDSSFTNGK
EEEEEHHHHHHHHHHCHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]