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The map label for this gene is pfpI [H]

Identifier: 71905667

GI number: 71905667

Start: 29810

End: 30391

Strand: Reverse

Name: pfpI [H]

Synonym: Daro_0025

Alternate gene names: 71905667

Gene position: 30391-29810 (Counterclockwise)

Preceding gene: 71905668

Following gene: 71905666

Centisome position: 0.68

GC content: 62.71

Gene sequence:

>582_bases
ATGGCTGCAAAGAAAATTCTGATGCTGACCGGTGACTACACCGAAGATTACGAGACCATGGTGCCCTTCCAAGCGCTGCT
GATGGTCGGCCACACAGTACATGCCGTCTGCCCGGGCAAGAAGGCCGGCGACTTCGTGCGCACCGCCATCCATGATTTTG
AAGGCGACCAGACCTACAGCGAGAAGCCCGGCCACAACTTCACCCTTAACGCCACTTTTTCCGACATTTCAGTCGAGTCG
TACGACGCCTTGGTCATTCCGGGCGGCCGCGCCCCGGAATATCTGCGCCTCAACCCGCAGGTACTGGCCATGGTCCAGCA
CTTCGCCAACACCGGCAAACCGATCGCGGCGATCTGCCATGGCGCCCAACTGCTCAGCGCCGCCGGCGTTCTGAGTGGCC
GTTCATGCAGCGCCTACCCCGCCTGCGCCCCCGAAGTCCGAGCCGCTGGCGGCCAGTACGCCGACATCCCGGTCGATCAG
GCCCATGTGGACGGCAATCTGGTTACGGCTCCGGCCTGGCCAGCGCATCCGGCCTGGCTGGCCAAGTTTCTTCCCCTGCT
CGGCACGCAGATCACCCTTTAA

Upstream 100 bases:

>100_bases
GCAGCCCGCTGCTACCCGCCGGGGCACCATTCTCTCCACAATGGGTCCACCCTTTTCCGACCGCATGGCCGGAGGGTTCA
CACCAACCAAGGAGACAACA

Downstream 100 bases:

>100_bases
AGCACCGAGGGCGGCTGGCTTGCCGGCTGCCCGTTCGTTCAGGAGGCTGCATGTGTGAAATCTACGTCAAGGCCGACCCG
ATGCTCTACGAGTCAAGGGC

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAAKKILMLTGDYTEDYETMVPFQALLMVGHTVHAVCPGKKAGDFVRTAIHDFEGDQTYSEKPGHNFTLNATFSDISVES
YDALVIPGGRAPEYLRLNPQVLAMVQHFANTGKPIAAICHGAQLLSAAGVLSGRSCSAYPACAPEVRAAGGQYADIPVDQ
AHVDGNLVTAPAWPAHPAWLAKFLPLLGTQITL

Sequences:

>Translated_193_residues
MAAKKILMLTGDYTEDYETMVPFQALLMVGHTVHAVCPGKKAGDFVRTAIHDFEGDQTYSEKPGHNFTLNATFSDISVES
YDALVIPGGRAPEYLRLNPQVLAMVQHFANTGKPIAAICHGAQLLSAAGVLSGRSCSAYPACAPEVRAAGGQYADIPVDQ
AHVDGNLVTAPAWPAHPAWLAKFLPLLGTQITL
>Mature_192_residues
AAKKILMLTGDYTEDYETMVPFQALLMVGHTVHAVCPGKKAGDFVRTAIHDFEGDQTYSEKPGHNFTLNATFSDISVESY
DALVIPGGRAPEYLRLNPQVLAMVQHFANTGKPIAAICHGAQLLSAAGVLSGRSCSAYPACAPEVRAAGGQYADIPVDQA
HVDGNLVTAPAWPAHPAWLAKFLPLLGTQITL

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=188, Percent_Identity=32.4468085106383, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20560; Mature: 20428

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKKILMLTGDYTEDYETMVPFQALLMVGHTVHAVCPGKKAGDFVRTAIHDFEGDQTYS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCC
EKPGHNFTLNATFSDISVESYDALVIPGGRAPEYLRLNPQVLAMVQHFANTGKPIAAICH
CCCCCCEEEEEEECCCEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHH
GAQLLSAAGVLSGRSCSAYPACAPEVRAAGGQYADIPVDQAHVDGNLVTAPAWPAHPAWL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCHHHH
AKFLPLLGTQITL
HHHHHHHCCCCCC
>Mature Secondary Structure 
AAKKILMLTGDYTEDYETMVPFQALLMVGHTVHAVCPGKKAGDFVRTAIHDFEGDQTYS
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCC
EKPGHNFTLNATFSDISVESYDALVIPGGRAPEYLRLNPQVLAMVQHFANTGKPIAAICH
CCCCCCEEEEEEECCCEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHH
GAQLLSAAGVLSGRSCSAYPACAPEVRAAGGQYADIPVDQAHVDGNLVTAPAWPAHPAWL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCEEECCCCCCCHHHH
AKFLPLLGTQITL
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]