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The map label for this gene is ymfF [H]

Identifier: 71911663

GI number: 71911663

Start: 1817033

End: 1818277

Strand: Reverse

Name: ymfF [H]

Synonym: M5005_Spy_1850

Alternate gene names: 71911663

Gene position: 1818277-1817033 (Counterclockwise)

Preceding gene: 71911669

Following gene: 71911662

Centisome position: 98.9

GC content: 30.52

Gene sequence:

>1245_bases
ATGAAAATTGTTCAGGGAGTACAACTTCATCTGATTAAGACCAAACAGTTTAAAACCAATCATATTACCTTTCGTTTTTC
AGGTGATTTGAACCAAAAAACAGTAGCAAAAAGAGTCTTAGTGGCACAGATGTTAGCAACAGCTAATGAGTGTTATCCAA
CTGTTAGGCAGTTTAGAGAAAAATTAGCACGACTTTATGGAGCTAGCTTGTCAACTAACGTGTTAACAAAAGGGTTAGTT
CATATTGTGGATATCGATATTACTTTTATTCAAGATAGATATGCTTGCAATGGGGAAAAAATACTAGATGAAATGATTCA
GTTTTTAAAAGATATCTTGTTCTCACCCCTATTATCCATCGCCCAGTATCAGCCTAAAGTTTTTGAGACTGAAAAAAATA
ATTTGATTAACTACATCGAGTCAGATAGAGAGGATTCTTTTTACTACAGCTCTCTTAAGGTAAAAGAATTGTTTTATTGT
AATAAGAATCTACAAATGTCAGAATATGGTAGCCCAGAACTAATTGCAAAAGAGACTGCCTATACTAGCTATCAAGAATT
TCATAAAATGCTCAATGAAGATCAGATTGATATTTTCATTTTAGGAGATTTTGATGATTATCGCGTTGTTCAGCTAATTC
ATCAATTTCCACTTGATAACCGAAATAAAAACCTAAATTTCTTTCATTTACAAAATTCTGTCAATATTATTAAAGAATCT
ATTGAAAAAAGAGCAGTTCATCAATCTATTTTACAATTAGCTTATCACTTCCCTTCAGTTTTTGGACAACGTGACTATTA
TGCTTTAGTTCTTTTAAATGGGTTGTTAGGCTCTTTTGCACATTCCCGTCTCTTTATAAAAATTAGAGAAGAAGAAGGAC
TTGCTTATAGTATAGGGTGTCGTTTTGATAGTTATACAGGATTATTTGAAATTTATACTGGAATTGACAGTCAACATCGC
ACTAAAACGTTACAACTAATCATCCAAGAATTAAATGCCATTAAAATGGGACGATTCTCAGAACAATTGATTAAAAAGAC
CAGATCGATGTTGTTGAATAATGCCTTATTATCAGAAGATTATAATAAAAATATAATTGAAAGAATATACAGATCTTCTT
ACATTGATTCTTCTTATTCTATTAAAAATTGGATTAAAGGGGTTAATGAAGTTAATAAAGCAGATATCATTAAAGTAGCT
AATCTTTTAAAGCTTCAAACTGTCTATTTTTTAGAAGGAATATAA

Upstream 100 bases:

>100_bases
ACTAGAATCCCGACAATTAAGTCAAAAAAAGTTATCACTCACCTAACCTGAATAAAAATGGTATAATCGTAAGGATCACA
CTATTTATTAAGGAAACATT

Downstream 100 bases:

>100_bases
AATGACAAAATTAGTAAAGATAAACTATCCTAATATTGACGAAGACCTTTACTATGTAAAATTAGAAAATGGTTTAACTG
TTTATTTTATAAAAAAAATA

Product: zinc protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVLLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQELNAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYRSSYIDSSYSIKNWIKGVNEVNKADIIKVA
NLLKLQTVYFLEGI

Sequences:

>Translated_414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVLLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQELNAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYRSSYIDSSYSIKNWIKGVNEVNKADIIKVA
NLLKLQTVYFLEGI
>Mature_414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVLLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQELNAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYRSSYIDSSYSIKNWIKGVNEVNKADIIKVA
NLLKLQTVYFLEGI

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48236; Mature: 48236

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFRE
CCCCCCCEEEEEEECEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLARLYGASLSTNVLTKGLVHIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSI
HHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYCNKNLQMSEYGSPELIAKETA
HHCCCCCEECCCHHHHHHHHCCCCCCEEEHHHHHHHHEEECCCCEECCCCCCCCEEHHHH
YTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
IEKRAVHQSILQLAYHFPSVFGQRDYYALVLLNGLLGSFAHSRLFIKIREEEGLAYSIGC
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEC
RFDSYTGLFEIYTGIDSQHRTKTLQLIIQELNAIKMGRFSEQLIKKTRSMLLNNALLSED
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
YNKNIIERIYRSSYIDSSYSIKNWIKGVNEVNKADIIKVANLLKLQTVYFLEGI
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFRE
CCCCCCCEEEEEEECEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLARLYGASLSTNVLTKGLVHIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSI
HHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYCNKNLQMSEYGSPELIAKETA
HHCCCCCEECCCHHHHHHHHCCCCCCEEEHHHHHHHHEEECCCCEECCCCCCCCEEHHHH
YTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
IEKRAVHQSILQLAYHFPSVFGQRDYYALVLLNGLLGSFAHSRLFIKIREEEGLAYSIGC
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEC
RFDSYTGLFEIYTGIDSQHRTKTLQLIIQELNAIKMGRFSEQLIKKTRSMLLNNALLSED
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
YNKNIIERIYRSSYIDSSYSIKNWIKGVNEVNKADIIKVANLLKLQTVYFLEGI
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]