Click here to switch to the map view.

The map label for this gene is yhfT [H]

Identifier: 71910246

GI number: 71910246

Start: 425813

End: 427060

Strand: Direct

Name: yhfT [H]

Synonym: M5005_Spy_0433

Alternate gene names: 71910246

Gene position: 425813-427060 (Clockwise)

Preceding gene: 71910245

Following gene: 71910247

Centisome position: 23.16

GC content: 37.42

Gene sequence:

>1248_bases
ATGCTGACAAAGCTAGAATATTGGGCAAAGCAATGCCCAAATAAAAAAGCTATCGTAGCCGATCAGATAAGCTTGACTTA
TCAAGAGCTATGGCAAGCGGTTTTAATAAAGGATCAGACAATAAAAGACAGTGTACCATATATCATCAGTCATAGTCGCT
ATCTTAATCAGTTACTCTCTTTTTTACGAGGATTAAAAGAAGGCAGTTGTCCTATCATTTTACACCCTAATATCTCAGGT
ACATTTCAGCAGCAAATAAAACACGTCGATGGTGAGCTTCTTAAAAAAGCTGATTTTGCTGTTTTGAGTTCGGGAACAAC
TGGCAAAGCAAAATTATTTTGGCGTCGTCTATCAACTTGGACGAGACTTTTTGATTATCAAAATAAGGTGTTTGGTATGA
CTGGTAATAGTTGTCTATTCTTACATGGTAGTTTTAGTTTTACTGGCAATCTTAACTTAGCATTAGCTCAACTATGGGCC
GGGGGATGTCTGGTTTTAAGCCAAAAGCTGTCTTTGAAAACGTGGTTAAGCTTATGGCAAGCAAAAAAGGTGAGTCACCT
TTACCTTTTACCGACCTACCTAAATCGCTTGCTACCTTATTTGACTAAGAACAACATGACTGCGACTCACTTATTGACCT
CTTCGCAAATGATATCACAAGAATTACTAAGACATTATTACAAAAAATTTCCTCAGCTTGAAATTGTCATTTTCTACGGG
GCTAGTGAATTATCTTTTATAACGTGGTGTAATGGCAGAGCTGCTGTCAAAATTAATGGTTTGGTAGGACAGCCCTTTCC
TGATGTGTCTATCAGTTTCAAAGATAAGGAAATTTTTGTAGAGACTCCTTATAGTGTAGAAGGAATGTCACAACCATACA
GTGTTTCAGACTTAGGAAAAATGAGCCCAGCGGGTTTAATTTTAGAAGGGCGACAAGATGACTGGGTTAATCAACGAGGA
GTGAAATGCCACCTGCCTAGCCTAGTTGAACTCGCTCACCAAGCGCCAAACGTCAAAGAAGCGCACGCTTTAAAGATAGG
AAAAGGAGAAAACGAAACCCTAATATTAGTATTAGTTTTGACTAAGAAGGATTGCCTAGCACCTATTAAAGACTTTTTAG
CTCTTTATTTAAACTCTGGACAACTTCCCAAGTACTATCTTGTGATTGATTGTTTGCCTTTAAAAGATAATGGTAAAATT
AATCGAGAAGTTCTTTTAAATAAAATACCCAAACAGTGGCTTAGTTAA

Upstream 100 bases:

>100_bases
GCTTTAGAGATTAAAAATGGACGCTATGGAATAGCTGCTATAGCAGCAGCTGGTGGCCAAGGGTTTGCTGTTTTACTAAA
ATATCATAAGGAGTTTAGTC

Downstream 100 bases:

>100_bases
CCACTTCAGGTTTCGTTTTGCTTATAGTGAGATACAAGTGACGATTCAGCTTTAGATGTGTTATAATATGGTCAAAAAAG
ATGAGGAGAAGGCCATGAAA

Product: long-chain-fatty-acid--CoA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLTKLEYWAKQCPNKKAIVADQISLTYQELWQAVLIKDQTIKDSVPYIISHSRYLNQLLSFLRGLKEGSCPIILHPNISG
TFQQQIKHVDGELLKKADFAVLSSGTTGKAKLFWRRLSTWTRLFDYQNKVFGMTGNSCLFLHGSFSFTGNLNLALAQLWA
GGCLVLSQKLSLKTWLSLWQAKKVSHLYLLPTYLNRLLPYLTKNNMTATHLLTSSQMISQELLRHYYKKFPQLEIVIFYG
ASELSFITWCNGRAAVKINGLVGQPFPDVSISFKDKEIFVETPYSVEGMSQPYSVSDLGKMSPAGLILEGRQDDWVNQRG
VKCHLPSLVELAHQAPNVKEAHALKIGKGENETLILVLVLTKKDCLAPIKDFLALYLNSGQLPKYYLVIDCLPLKDNGKI
NREVLLNKIPKQWLS

Sequences:

>Translated_415_residues
MLTKLEYWAKQCPNKKAIVADQISLTYQELWQAVLIKDQTIKDSVPYIISHSRYLNQLLSFLRGLKEGSCPIILHPNISG
TFQQQIKHVDGELLKKADFAVLSSGTTGKAKLFWRRLSTWTRLFDYQNKVFGMTGNSCLFLHGSFSFTGNLNLALAQLWA
GGCLVLSQKLSLKTWLSLWQAKKVSHLYLLPTYLNRLLPYLTKNNMTATHLLTSSQMISQELLRHYYKKFPQLEIVIFYG
ASELSFITWCNGRAAVKINGLVGQPFPDVSISFKDKEIFVETPYSVEGMSQPYSVSDLGKMSPAGLILEGRQDDWVNQRG
VKCHLPSLVELAHQAPNVKEAHALKIGKGENETLILVLVLTKKDCLAPIKDFLALYLNSGQLPKYYLVIDCLPLKDNGKI
NREVLLNKIPKQWLS
>Mature_415_residues
MLTKLEYWAKQCPNKKAIVADQISLTYQELWQAVLIKDQTIKDSVPYIISHSRYLNQLLSFLRGLKEGSCPIILHPNISG
TFQQQIKHVDGELLKKADFAVLSSGTTGKAKLFWRRLSTWTRLFDYQNKVFGMTGNSCLFLHGSFSFTGNLNLALAQLWA
GGCLVLSQKLSLKTWLSLWQAKKVSHLYLLPTYLNRLLPYLTKNNMTATHLLTSSQMISQELLRHYYKKFPQLEIVIFYG
ASELSFITWCNGRAAVKINGLVGQPFPDVSISFKDKEIFVETPYSVEGMSQPYSVSDLGKMSPAGLILEGRQDDWVNQRG
VKCHLPSLVELAHQAPNVKEAHALKIGKGENETLILVLVLTKKDCLAPIKDFLALYLNSGQLPKYYLVIDCLPLKDNGKI
NREVLLNKIPKQWLS

Specific function: May be involved in fatty acid metabolism [H]

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: NA

Molecular weight: Translated: 46967; Mature: 46967

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLEYWAKQCPNKKAIVADQISLTYQELWQAVLIKDQTIKDSVPYIISHSRYLNQLLS
CCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHH
FLRGLKEGSCPIILHPNISGTFQQQIKHVDGELLKKADFAVLSSGTTGKAKLFWRRLSTW
HHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRLFDYQNKVFGMTGNSCLFLHGSFSFTGNLNLALAQLWAGGCLVLSQKLSLKTWLSLWQ
HHHHHHCCCEEECCCCCEEEEEECEEEECCCHHHEEHHHCCCEEEEEHHHHHHHHHHHHH
AKKVSHLYLLPTYLNRLLPYLTKNNMTATHLLTSSQMISQELLRHYYKKFPQLEIVIFYG
HHCCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ASELSFITWCNGRAAVKINGLVGQPFPDVSISFKDKEIFVETPYSVEGMSQPYSVSDLGK
CCCEEEEEEECCEEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCHHHHCC
MSPAGLILEGRQDDWVNQRGVKCHLPSLVELAHQAPNVKEAHALKIGKGENETLILVLVL
CCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHCCCCCHHHEEEECCCCCCEEEEEEEE
TKKDCLAPIKDFLALYLNSGQLPKYYLVIDCLPLKDNGKINREVLLNKIPKQWLS
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTKLEYWAKQCPNKKAIVADQISLTYQELWQAVLIKDQTIKDSVPYIISHSRYLNQLLS
CCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHH
FLRGLKEGSCPIILHPNISGTFQQQIKHVDGELLKKADFAVLSSGTTGKAKLFWRRLSTW
HHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRLFDYQNKVFGMTGNSCLFLHGSFSFTGNLNLALAQLWAGGCLVLSQKLSLKTWLSLWQ
HHHHHHCCCEEECCCCCEEEEEECEEEECCCHHHEEHHHCCCEEEEEHHHHHHHHHHHHH
AKKVSHLYLLPTYLNRLLPYLTKNNMTATHLLTSSQMISQELLRHYYKKFPQLEIVIFYG
HHCCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ASELSFITWCNGRAAVKINGLVGQPFPDVSISFKDKEIFVETPYSVEGMSQPYSVSDLGK
CCCEEEEEEECCEEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCHHHHCC
MSPAGLILEGRQDDWVNQRGVKCHLPSLVELAHQAPNVKEAHALKIGKGENETLILVLVL
CCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHCCCCCHHHEEEECCCCCCEEEEEEEE
TKKDCLAPIKDFLALYLNSGQLPKYYLVIDCLPLKDNGKINREVLLNKIPKQWLS
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]