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The map label for this gene is yidD [C]

Identifier: 71910125

GI number: 71910125

Start: 318682

End: 318945

Strand: Direct

Name: yidD [C]

Synonym: M5005_Spy_0311

Alternate gene names: 71910125

Gene position: 318682-318945 (Clockwise)

Preceding gene: 71910124

Following gene: 71910126

Centisome position: 17.33

GC content: 34.85

Gene sequence:

>264_bases
ATGATGAAAAAACTATTAATAGTATCTGTTAAAGCTTATCAAAAATACATTTCTCCTTTATCTCCTCCTAGTTGTCGCTA
CAAGCCAACCTGTTCAGCTTATATGTTAACTGCTATTGAAAAACATGGTACTAAGGGAATATTAATGGGGATAGCAAGAA
TATTAAGATGTCACCCTTTTGTTGCTGGTGGTGTCGATCCTGTTCCAGAAGATTTTAGCCTAATGAGAAATAAAAACACG
TCTAAAAACGCTGAAAAGGCATGA

Upstream 100 bases:

>100_bases
GTTTTGGGACCGTCGACTTAAAGGGACTAAGACCAGGAGAAGCAAGACGCTTAAATAAAAAAGAAATAAGTCAACTGCAT
AACTTAGCTAATACGAAAAA

Downstream 100 bases:

>100_bases
CTTTATCAAAAAATGGCTTGACATTGATAGCTGAAGTGTTATAATGGAAAATAAGCATTCGTTGGTTTAAATCAAACCTG
TTATGATTTAAGTTAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MMKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIARILRCHPFVAGGVDPVPEDFSLMRNKNT
SKNAEKA

Sequences:

>Translated_87_residues
MMKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIARILRCHPFVAGGVDPVPEDFSLMRNKNT
SKNAEKA
>Mature_87_residues
MMKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIARILRCHPFVAGGVDPVPEDFSLMRNKNT
SKNAEKA

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=67, Percent_Identity=46.2686567164179, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y300_STRPM (Q48V42)

Other databases:

- EMBL:   CP000056
- RefSeq:   YP_279769.1
- EnsemblBacteria:   EBSTRT00000032749
- GeneID:   3573252
- GenomeReviews:   CP000056_GR
- KEGG:   spb:M28_Spy0300
- GeneTree:   EBGT00050000027872
- HOGENOM:   HBG634291
- OMA:   WLATTVI
- ProtClustDB:   PRK00041
- BioCyc:   SPYO319701:M28_SPY0300-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9643; Mature: 9643

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIARILRCHPF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VAGGVDPVPEDFSLMRNKNTSKNAEKA
CCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIARILRCHPF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VAGGVDPVPEDFSLMRNKNTSKNAEKA
CCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA