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The map label for this gene is nisX1 [H]

Identifier: 71909981

GI number: 71909981

Start: 179056

End: 179625

Strand: Reverse

Name: nisX1 [H]

Synonym: M5005_Spy_0167

Alternate gene names: 71909981

Gene position: 179625-179056 (Counterclockwise)

Preceding gene: 71909982

Following gene: 71909980

Centisome position: 9.77

GC content: 38.95

Gene sequence:

>570_bases
TTGAATAGTCATCACGCTTGTCAAACTCTTCAAGTCTCCCGTTCAGGTTTCTATGCTTATTTAAAACGTCGTCCCTCTTC
AAGGCATGTTGAGAATGAAGCTTTGAAGGAAATGATTAAAGCCATTTTCTATGAACATAAAGAGCGTTACGGAAGTGTAC
GAATTACCCAAGAACTTTGTAGACGTGGCATCCATGTCAATTATAAACGTGTTGGTAGACTCCTTCATCAGCTAGGTCTC
TATGCTAAAGGAAGTCGATATCAATATAAATACTATAACCGTCGACGTTCTTCATTAACTCGTCCCAATCTTGTTAATCA
ATGTTTCCAAGCGACTGGTAAGAATAAATTATGGCTAGGAGACCTAACCTACATTCCTACACAAGAAGGAATACTTTATG
TGTCTGTCTTTATAGACGTTTATAGTAGAAAGATTGTTGGTTGGGCAATGGGCCGACGTATGCAAGACAAGTTGGTAACA
GAAGCTTTCAATCAAGCTTATAATAGAGAAAAGCCTAAAGAAGGGGTAATCGTCCATACAGATCAGGGTTCTCAATATAC
CGGAGCATGA

Upstream 100 bases:

>100_bases
AACTGCTACAGGAGGAATTAGCTCTTCTAAAAAAGTTCCAGGTCTTTTTGAAGCCAAACCGGAAATAAAATTTCAGTTTC
TGAAGGAAAATAGTGTTAGC

Downstream 100 bases:

>100_bases
TTTCAGGACCTACTTAGACAGAAAAAATGTAAGTCCAGGATGAGTCGAAAAGGTAATCCATACGATAATGCACTCATGGA
ATCCTTTTATAAAACATTAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELCRRGIHVNYKRVGRLLHQLGL
YAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLGDLTYIPTQEGILYVSVFIDVYSRKIVGWAMGRRMQDKLVT
EAFNQAYNREKPKEGVIVHTDQGSQYTGA

Sequences:

>Translated_189_residues
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELCRRGIHVNYKRVGRLLHQLGL
YAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLGDLTYIPTQEGILYVSVFIDVYSRKIVGWAMGRRMQDKLVT
EAFNQAYNREKPKEGVIVHTDQGSQYTGA
>Mature_189_residues
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELCRRGIHVNYKRVGRLLHQLGL
YAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLGDLTYIPTQEGILYVSVFIDVYSRKIVGWAMGRRMQDKLVT
EAFNQAYNREKPKEGVIVHTDQGSQYTGA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=187, Percent_Identity=36.8983957219251, Blast_Score=105, Evalue=2e-23,
Organism=Escherichia coli, GI1788405, Length=185, Percent_Identity=40.5405405405405, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1787263, Length=185, Percent_Identity=40.5405405405405, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1786753, Length=185, Percent_Identity=40.5405405405405, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1786570, Length=185, Percent_Identity=40.5405405405405, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1786490, Length=185, Percent_Identity=40.5405405405405, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1789981, Length=176, Percent_Identity=32.3863636363636, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22176; Mature: 22176

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELC
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRGIHVNYKRVGRLLHQLGLYAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLG
HCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEC
DLTYIPTQEGILYVSVFIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHT
CEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DQGSQYTGA
CCCCCCCCC
>Mature Secondary Structure
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERYGSVRITQELC
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRGIHVNYKRVGRLLHQLGLYAKGSRYQYKYYNRRRSSLTRPNLVNQCFQATGKNKLWLG
HCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEC
DLTYIPTQEGILYVSVFIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHT
CEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DQGSQYTGA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]