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The map label for this gene is rofA

Identifier: 71909920

GI number: 71909920

Start: 115594

End: 117087

Strand: Reverse

Name: rofA

Synonym: M5005_Spy_0106

Alternate gene names: NA

Gene position: 117087-115594 (Counterclockwise)

Preceding gene: 71909926

Following gene: 71909919

Centisome position: 6.37

GC content: 34.07

Gene sequence:

>1494_bases
TTGATAGAAAAATACTTGGAATCATCAATCGAATCAAAATGTCAGTTAATTGTCTTGTTTTTTAAGACATCTTATTTGCC
AATAACTGAGGTAGCAGAAAAAACTGGCTTAACCTTTTTACAACTAAACCATTATTGTGAGGAACTGAATGCCTTTTTCC
CTGGTAGTCTGTCTATGACCATCCAAAAAAGGATGATATCTTGCCAATTTACACATCCTTTTAAAGAAACTTATCTTTAC
CAACTCTATGCATCATCTAATGTCTTACAATTACTAGCCTTTTTAATAAAAAATGGTTCCCACTCTCGTCCCCTTACGGA
TTTTGCAAGAAGTCATTTTTTATCAAACTCCTCAGCTTATCGGATGCGCGAAGCATTGATTCCTTTATTAAGAAACTTTG
AATTAAAACTCTCTAAGAACAAGATTGTCGGTGAGGAATATCGCATCCGTTACCTCATCGCTCTGCTATATAGTAAGTTT
GGCATTAAAGTTTATGACTTGACGCAGCAAGACAAAAACACTATTCATAGCTTTTTATCCCATAGTTCCACCCACCTTAA
AACCTCTCCTTGGTTATCGGAATCGTTTTCTTTCTATGACATTTTATTAGCTTTATCGTGGAAGCGGCATCAATTTTCGG
TAACTATTCCCCAAACCAGAATTTTTCAACAATTAAAAAAACTTTTTGTCTACGATTCTTTGAAAAAAAGTAGCCATGAT
ATTATCGAAACTTACTGCCAACTAAACTTTTCAGCAGGAGATTTGGACTACCTCTATTTAATTTATATCACCGCTAATAA
TTCTTTTGCGAGCTTACAATGGACACCTGAGCATATCAGACAATATTGTCAACTTTTTGAAGAAAATGATACTTTTCGCC
TGCTTTTAAATCCTATCATCACTCTTTTACCTAACCTAAAAGAGCAAAAGGCTAGTTTAGTAAAAGCTCTTATGTTTTTT
TCAAAATCATTCTTGTTTAATCTGCAACATTTTATTCCTGAGACCAACTTATTCGTTTCTCCGTACTATAAAGGAAACCA
AAAACTCTATACGTCCTTAAAGTTAATTGTCGAAGAGTGGATGGCCAAACTTCCTGGTAAGCGTGACTTGAACCATAAGC
ATTTTCATCTTTTTTGCCACTATGTCGAGCAAAGTCTAAGAAATATCCAACCTCCTTTAGTTGTTGTTTTCGTAGCCAGT
AATTTTATCAATGCTCATCTCCTAACGGATTCTTTTCCAAGGTATTTCTCGGATAAAAGCATTGATTTTCATTCCTATTA
TCTATTGCAAGATAATGTTTATCAAATTCCTGATTTAAAGCCAGATTTGGTCATCACTCACAGTCAACTGATTCCTTTTG
TTCACCATGAACTTACAAAAGGAATTGCTGTTGCTGAAATATCTTTTGATGAATCGATTCTGTCTATCCAAGAATTGATG
TATCAAGTTAAAGAGGAAAAATTCCAAGCTGATTTAACCAAGCAATTAACATAA

Upstream 100 bases:

>100_bases
ATTTGACTTCTATTTTTAGCTTAGATAGAATTGAAATAGGAGAATACACTTATCAAAGACTTATTTGGCTTTCTAAGTGT
AGGAAGAGAGGTCCCTTTCC

Downstream 100 bases:

>100_bases
GCGCCATGTCACCACATTGCGCGACTTTAGACCACACCTTAACTTAATCCCGAGTCATTCTCTGGGATTTTTTACTGTCT
ATCTGTATTGATTTTTCAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein-RofA ; Regulatory Protein; RofA Family Transcriptional Regulator; Regulatory Protein RofA ; Transcriptional Regulator RofA Familiy; RofA Regulatory Protein; RofA/Nra-Like Transcriptional Regulator

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY
QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF
GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD
IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF
SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS
NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM
YQVKEEKFQADLTKQLT

Sequences:

>Translated_497_residues
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY
QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF
GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD
IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF
SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS
NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM
YQVKEEKFQADLTKQLT
>Mature_497_residues
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY
QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF
GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD
IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF
SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS
NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM
YQVKEEKFQADLTKQLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58335; Mature: 58335

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMT
CCHHHHHHHHHCHHEEEEEEEECCCCCHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHH
IQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAY
HHHHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH
RMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLS
HHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHC
HSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD
CCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHH
IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPII
HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHH
TLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEW
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
MAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVASNFINAHLLTDSFPRYFSDKS
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEEECCCCCHHCCCCC
IDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM
CCEEEEEEEECCEEECCCCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH
YQVKEEKFQADLTKQLT
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMT
CCHHHHHHHHHCHHEEEEEEEECCCCCHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHH
IQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAY
HHHHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH
RMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLS
HHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHC
HSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD
CCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHH
IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPII
HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHH
TLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEW
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
MAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVASNFINAHLLTDSFPRYFSDKS
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEEECCCCCHHCCCCC
IDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM
CCEEEEEEEECCEEECCCCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH
YQVKEEKFQADLTKQLT
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA