Click here to switch to the map view.

The map label for this gene is rpmC [H]

Identifier: 71909866

GI number: 71909866

Start: 69115

End: 69321

Strand: Direct

Name: rpmC [H]

Synonym: M5005_Spy_0052

Alternate gene names: 71909866

Gene position: 69115-69321 (Clockwise)

Preceding gene: 71909865

Following gene: 71909867

Centisome position: 3.76

GC content: 34.78

Gene sequence:

>207_bases
ATGAAACTTCAAGAAATTAAAGATTTTGTTAAAGAGCTTCGTGGATTGTCTCAAGAAGAACTTGCTAAGAAAGAAAACGA
ACTCAAAAAAGAATTGTTTGATCTTCGTTTCCAAGCTGCAGCAGGTCAACTTGAAAAGACTGCTCGCCTTGACGAAGTTA
AGAAACAAATTGCACGTGTTAAAACTGTGCAATCAGAAATGAAATAA

Upstream 100 bases:

>100_bases
TGTTTCTGAAGAAATTGCTCGCGAAGCATTACGTCTTGCTAGCCACAAATTACCAGTTAAGTGCAAATTCGTAAAACGTG
AAGCAGAATAAGGAGAAGAC

Downstream 100 bases:

>100_bases
TAGATTGGGAAAGGAGAAATTCTAAATGGAACGTAATCAACGTAAAACTCTTTACGGACGCGTAGTGTCTGACAAGATGG
ACAAAACAATCACAGTTGTA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK

Sequences:

>Translated_68_residues
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK
>Mature_68_residues
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 7962; Mature: 7962

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVQSEMK
HHHHHHCC
>Mature Secondary Structure
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVQSEMK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186 [H]