| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is leuS [H]
Identifier: 71893995
GI number: 71893995
Start: 847459
End: 849831
Strand: Reverse
Name: leuS [H]
Synonym: MHJ_0647
Alternate gene names: 71893995
Gene position: 849831-847459 (Counterclockwise)
Preceding gene: 71893998
Following gene: 71893994
Centisome position: 94.7
GC content: 30.85
Gene sequence:
>2373_bases ATGTTAGATCACCGAGCTATTGAAAAAAAGTGACAAGATTACTGGTATAAAAATAAGGTTTTCAAAACAACCGAGACATC TAGAAAAAAAGCCTATATTCTCGATATGTTTCCCTATCCTTCGGCTTCTGGTCTGCATCTAGGCCATCCGATTGGCTATA CGGCTTCTGATATTGTTGCTAGATTTAAACGTTTAAATGGTTTTGACGTGCTTCATCCGATGGGTTGGGATGCTTTTGGT TTGCCTGCAGAGCAATATGCGATAAAAACAGGTAATCATCCGGGTGAATTTACAAAAAGAAATATTGAAAATTTTAAAAA ACAAATAATTTCTTTTGGATTTTCTTATGATTGGGATAAGGAAATTAACACCTCTGATCCAGAATTTTATGTCCAAACTC AGTGGATTTTTAAACTATTATATAAGGCAAATTTAGCTGAGATTCGCGAAGTTGAAGTCAATTGATGCCCGGAATTAGGC ACTGTTTTAGCAAATGAGGAATTAAAAAGGGAAAAAAATGGTGCGCTTGTCAGTGAAAGAGGAAATTTTCCTGTAATTTT AAAAAAAATGAAACAGTGAGTTTTAAAAATCACTGAATATGCACAGAAATTACTTGATGGACTTGATCAAGTTGATTTTC CTGATTCTTTAAAAACTTTACAAAAAAAATGAATCGGTAAATCAAAAGGGTGAAAAATTAAATTTTTAATTGAAAAAACC GGTGAATTTCTTGAAATTTTTACAACAAAAATCGAAACTTTTTATGGAGTAAGTTTCCTAGCCCTTGCACCTTTACATAA TTTTGCTCAAAAATTGGCTAAAAATAAGGAAAAAATCAGCCAATTTATTGAGCAAAACAGCTTTTCAAGTCCAAAATTAC AAAGTAAAATGACAGGAATTTTCACTGGATTATATGCGGTTCATCCTTTAAATTCAAGTAAAATTCCGATTTATATTACA AATTATGTTCTAAATAACTATGCAACTTCTGCAATTATGGGGGTTCCTGCCCATAATTTAGCTGATTTAGAATTTGCTCA AATTTTCCAAATTGATTATGTTAAAGTAATAAATCAAGAAAATTTACTTATAAATTCTGCAGAATTTTCTGGTTTGACTA TTAAAGAGGGAGCAAATTCTATTTTCAGTAAGCTAAATTCAATGAATTTAGTTCAAAAAACTACAATTTTTCGACTAAAA GATTGAGTTTTTTCCCGTCAGAGATACTGAGGAGAACCTTTTCCGGTTTATTTTGATGAAAAAGGAAAGATTTATCTTGA AGAGAAAATAGTTGAGCTCCCACATACTGATAAAATTATGCCTTCTGGTGATGGCCAGTCCCCACTTGCATCGATAAAAG ACTGAGTTTTCTTTGAAAAAAATGGGAAATACTACCGCCGGGAAACAAATACAATGCCACAATGAAGCGGAAGCTCATGG TATTATCTAGCTTTTATTTTAAAAGAAAAAGATAAATATTTGCCGCTTGATTCAAAAATTGCCTATGATAAATTCAAAAA ATGGCTGCCAGTTGATCTTTATATAGGGGGTCAGGAGCATGCGGTTGGCCATTTAATTTATTCCCGTTTTTGACATAAGG TTTTATTTGATGCGGGGATAGTTCCAAATTCTGAACCTTTTCAAAAAATAATTCATCAAGGAATGTTACTAGGTTCTGAT GGTCAAAAAATGTCGAAATCTAAAGGAAATACGATAAATCCTACGGAAATCATAGACAAATTTGGCGCTGATACAATTAG AATTTTTTTAATGTTTATGGGTCCGATTGGGGATCTTCGACTTTGAGATGAAAATGGAGTAGTTTCAATTTTTAACTGAA TTCAACGGGTACAAAGAACAATTTTAGCTGACTATAAAATTGACCCCGAACTTGAAAAAGACTATGAATTTACGTATTTT TTCAATAATTTTGTTTTCGAAATCACAAATTTAATCGAAACTTTTAAGTTCAATGTGGCAATTTCAAAATTAATGGTTTA CATTAATTTTCTAAATAAAAAGCAAAAAATTCCTTCAAAAAATTATCTGACAGATTTTTTAATTATTTTCTCAGTTTTTG CACCGCATACAGCAGAAGAATTACTTGAAAAATTAGGACAAAAACCCTTAAATTTCCAGATTTGACCTCAATTTGATCGG TCAAAAATTTTTAAAAATACTTTTCATTTACCTGTTTCAATTAATGGGAAAAACCGCGGAATTCTCGAATTAACAGATGA AAAATCACAAGAAGAAATCATCGAGATTGCCAAAAAAGACTATAAAATACGTAACTATTTGCAAAATAAGCAAATAATAA AAGTCATTTATATCCCGAGAAAAATTCTAAATTTTATTCTCAAAAATAATTAA
Upstream 100 bases:
>100_bases GGAATTAGTACTTTTTTAAATATTTCTAATTTTTCCTTTTTAGAAAAGTCACTTTTGGCTTTTAATTTTAAAAATTTATG CTATAATTTAGGTAACTATC
Downstream 100 bases:
>100_bases AATATGAAAAAATTTTTATTTCCCTTTTCAGTTTCATTTATAAGCTTTTTAGCAGAAATTTTGACCTTGTTATTAAAGGT TATTTTTTATGATAGTTTTG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MLDHRAIEKKWQDYWYKNKVFKTTETSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFG LPAEQYAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANLAEIREVEVNWCPELG TVLANEELKREKNGALVSERGNFPVILKKMKQWVLKITEYAQKLLDGLDQVDFPDSLKTLQKKWIGKSKGWKIKFLIEKT GEFLEIFTTKIETFYGVSFLALAPLHNFAQKLAKNKEKISQFIEQNSFSSPKLQSKMTGIFTGLYAVHPLNSSKIPIYIT NYVLNNYATSAIMGVPAHNLADLEFAQIFQIDYVKVINQENLLINSAEFSGLTIKEGANSIFSKLNSMNLVQKTTIFRLK DWVFSRQRYWGEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKDWVFFEKNGKYYRRETNTMPQWSGSSW YYLAFILKEKDKYLPLDSKIAYDKFKKWLPVDLYIGGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKIIHQGMLLGSD GQKMSKSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRLWDENGVVSIFNWIQRVQRTILADYKIDPELEKDYEFTYF FNNFVFEITNLIETFKFNVAISKLMVYINFLNKKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQIWPQFDR SKIFKNTFHLPVSINGKNRGILELTDEKSQEEIIEIAKKDYKIRNYLQNKQIIKVIYIPRKILNFILKNN
Sequences:
>Translated_790_residues MLDHRAIEKK*QDYWYKNKVFKTTETSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFG LPAEQYAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANLAEIREVEVN*CPELG TVLANEELKREKNGALVSERGNFPVILKKMKQ*VLKITEYAQKLLDGLDQVDFPDSLKTLQKK*IGKSKG*KIKFLIEKT GEFLEIFTTKIETFYGVSFLALAPLHNFAQKLAKNKEKISQFIEQNSFSSPKLQSKMTGIFTGLYAVHPLNSSKIPIYIT NYVLNNYATSAIMGVPAHNLADLEFAQIFQIDYVKVINQENLLINSAEFSGLTIKEGANSIFSKLNSMNLVQKTTIFRLK D*VFSRQRY*GEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKD*VFFEKNGKYYRRETNTMPQ*SGSSW YYLAFILKEKDKYLPLDSKIAYDKFKKWLPVDLYIGGQEHAVGHLIYSRF*HKVLFDAGIVPNSEPFQKIIHQGMLLGSD GQKMSKSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRL*DENGVVSIFN*IQRVQRTILADYKIDPELEKDYEFTYF FNNFVFEITNLIETFKFNVAISKLMVYINFLNKKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQI*PQFDR SKIFKNTFHLPVSINGKNRGILELTDEKSQEEIIEIAKKDYKIRNYLQNKQIIKVIYIPRKILNFILKNN >Mature_790_residues MLDHRAIEKK*QDYWYKNKVFKTTETSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVARFKRLNGFDVLHPMGWDAFG LPAEQYAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKEINTSDPEFYVQTQWIFKLLYKANLAEIREVEVN*CPELG TVLANEELKREKNGALVSERGNFPVILKKMKQ*VLKITEYAQKLLDGLDQVDFPDSLKTLQKK*IGKSKG*KIKFLIEKT GEFLEIFTTKIETFYGVSFLALAPLHNFAQKLAKNKEKISQFIEQNSFSSPKLQSKMTGIFTGLYAVHPLNSSKIPIYIT NYVLNNYATSAIMGVPAHNLADLEFAQIFQIDYVKVINQENLLINSAEFSGLTIKEGANSIFSKLNSMNLVQKTTIFRLK D*VFSRQRY*GEPFPVYFDEKGKIYLEEKIVELPHTDKIMPSGDGQSPLASIKD*VFFEKNGKYYRRETNTMPQ*SGSSW YYLAFILKEKDKYLPLDSKIAYDKFKKWLPVDLYIGGQEHAVGHLIYSRF*HKVLFDAGIVPNSEPFQKIIHQGMLLGSD GQKMSKSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRL*DENGVVSIFN*IQRVQRTILADYKIDPELEKDYEFTYF FNNFVFEITNLIETFKFNVAISKLMVYINFLNKKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQI*PQFDR SKIFKNTFHLPVSINGKNRGILELTDEKSQEEIIEIAKKDYKIRNYLQNKQIIKVIYIPRKILNFILKNN
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=875, Percent_Identity=29.1428571428571, Blast_Score=308, Evalue=2e-83, Organism=Escherichia coli, GI1786861, Length=877, Percent_Identity=32.9532497149373, Blast_Score=414, Evalue=1e-117, Organism=Caenorhabditis elegans, GI71997510, Length=730, Percent_Identity=28.0821917808219, Blast_Score=208, Evalue=8e-54, Organism=Caenorhabditis elegans, GI71997517, Length=730, Percent_Identity=28.0821917808219, Blast_Score=208, Evalue=1e-53, Organism=Caenorhabditis elegans, GI212645227, Length=278, Percent_Identity=25.8992805755396, Blast_Score=78, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323414, Length=858, Percent_Identity=32.983682983683, Blast_Score=318, Evalue=2e-87, Organism=Drosophila melanogaster, GI21355409, Length=841, Percent_Identity=27.705112960761, Blast_Score=254, Evalue=2e-67,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 89527; Mature: 89527
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHRAIEKKQDYWYKNKVFKTTETSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVAR CCCCHHHHHHHCCHHHCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH FKRLNGFDVLHPMGWDAFGLPAEQYAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKE HHHCCCCCEECCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC INTSDPEFYVQTQWIFKLLYKANLAEIREVEVNCPELGTVLANEELKREKNGALVSERGN CCCCCCCEEEEHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHCHHHHHHHCCCEEECCCC FPVILKKMKQVLKITEYAQKLLDGLDQVDFPDSLKTLQKKIGKSKGKIKFLIEKTGEFLE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCHHHH IFTTKIETFYGVSFLALAPLHNFAQKLAKNKEKISQFIEQNSFSSPKLQSKMTGIFTGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVHPLNSSKIPIYITNYVLNNYATSAIMGVPAHNLADLEFAQIFQIDYVKVINQENLLIN HEECCCCCCCCEEEEHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHEEECCCCEEEE SAEFSGLTIKEGANSIFSKLNSMNLVQKTTIFRLKDVFSRQRYGEPFPVYFDEKGKIYLE CCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEE EKIVELPHTDKIMPSGDGQSPLASIKDVFFEKNGKYYRRETNTMPQSGSSWYYLAFILKE EHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEC KDKYLPLDSKIAYDKFKKWLPVDLYIGGQEHAVGHLIYSRFHKVLFDAGIVPNSEPFQKI CCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IHQGMLLGSDGQKMSKSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRLDENGVVSIF HHCCEEECCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCEEEE NIQRVQRTILADYKIDPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMVYINFLN EHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQIPQFDRSKIFKNTFHLPVS HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEE INGKNRGILELTDEKSQEEIIEIAKKDYKIRNYLQNKQIIKVIYIPRKILNFILKNN ECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCC >Mature Secondary Structure MLDHRAIEKKQDYWYKNKVFKTTETSRKKAYILDMFPYPSASGLHLGHPIGYTASDIVAR CCCCHHHHHHHCCHHHCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH FKRLNGFDVLHPMGWDAFGLPAEQYAIKTGNHPGEFTKRNIENFKKQIISFGFSYDWDKE HHHCCCCCEECCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC INTSDPEFYVQTQWIFKLLYKANLAEIREVEVNCPELGTVLANEELKREKNGALVSERGN CCCCCCCEEEEHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHCHHHHHHHCCCEEECCCC FPVILKKMKQVLKITEYAQKLLDGLDQVDFPDSLKTLQKKIGKSKGKIKFLIEKTGEFLE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHHCCHHHH IFTTKIETFYGVSFLALAPLHNFAQKLAKNKEKISQFIEQNSFSSPKLQSKMTGIFTGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVHPLNSSKIPIYITNYVLNNYATSAIMGVPAHNLADLEFAQIFQIDYVKVINQENLLIN HEECCCCCCCCEEEEHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHEEECCCCEEEE SAEFSGLTIKEGANSIFSKLNSMNLVQKTTIFRLKDVFSRQRYGEPFPVYFDEKGKIYLE CCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEE EKIVELPHTDKIMPSGDGQSPLASIKDVFFEKNGKYYRRETNTMPQSGSSWYYLAFILKE EHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEC KDKYLPLDSKIAYDKFKKWLPVDLYIGGQEHAVGHLIYSRFHKVLFDAGIVPNSEPFQKI CCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IHQGMLLGSDGQKMSKSKGNTINPTEIIDKFGADTIRIFLMFMGPIGDLRLDENGVVSIF HHCCEEECCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCEEEE NIQRVQRTILADYKIDPELEKDYEFTYFFNNFVFEITNLIETFKFNVAISKLMVYINFLN EHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQIPQFDRSKIFKNTFHLPVS HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEE INGKNRGILELTDEKSQEEIIEIAKKDYKIRNYLQNKQIIKVIYIPRKILNFILKNN ECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11353084 [H]