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The map label for this gene is rplI [H]

Identifier: 71893993

GI number: 71893993

Start: 845040

End: 845477

Strand: Reverse

Name: rplI [H]

Synonym: MHJ_0645

Alternate gene names: 71893993

Gene position: 845477-845040 (Counterclockwise)

Preceding gene: 71893994

Following gene: 71893992

Centisome position: 94.21

GC content: 29.22

Gene sequence:

>438_bases
ATGAAAGTAATCCTAATTAAAGATACAAAAGATGGAAAAGCGAATACAATTATCGATGTTTCCCCTGGCTATGCCACTAA
TTTTTTATTCAAGAATAAGTTAGCCGAGCCCCTAAATGCCCGAACAGAAAAACTTTTAGTTAAAAGAAAACAGCAAATTG
AGATCGAAAAACAAGAAAAACAGGAACAAATTGCCAAACTAAAAATCGAAATTGAAAAGCTAGTTCTCTGGTTTAAATTA
AAGGGAAATAAAGAATCAGTTCATGGGGCAATTACAGCTAAAAAAATTAAAAAAGAACTTGAAATTAAAGGGATTTTTGT
TGATAAACAAGCAATCCAAACAAGTGGAATTTCCACTTTTGGCACTAGTTTTGTTGATATAAAATTAAGTTCTCAAACTA
TTGCTAAATTAAAAATAAATATCACAAAAGATGAATAA

Upstream 100 bases:

>100_bases
GGTGGGGGTGGTAGTTTTAATTCGGCAGCCGCTTATTCAACAGTTGAGACTTTTTCTGAATTTGTCAATAATATCAAACT
AGCAATTAAAAGGAGAGAAT

Downstream 100 bases:

>100_bases
TTCTCGTTATAATTCTCCTGAACTTGAAGCATTTATCATCTCTTTTCTTTTAGCAAATCCTGAAAAAGTTGTTAATTTTA
TTGACATACTTAATCCGGAT

Product: 50S ribosomal protein L9

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNARTEKLLVKRKQQIEIEKQEKQEQIAKLKIEIEKLVLWFKL
KGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTFGTSFVDIKLSSQTIAKLKINITKDE

Sequences:

>Translated_145_residues
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNARTEKLLVKRKQQIEIEKQEKQEQIAKLKIEIEKLVLWFKL
KGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTFGTSFVDIKLSSQTIAKLKINITKDE
>Mature_145_residues
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNARTEKLLVKRKQQIEIEKQEKQEQIAKLKIEIEKLVLWFKL
KGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTFGTSFVDIKLSSQTIAKLKINITKDE

Specific function: Binds to the 23S rRNA [H]

COG id: COG0359

COG function: function code J; Ribosomal protein L9

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L9P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000244
- InterPro:   IPR009027
- InterPro:   IPR020594
- InterPro:   IPR020069
- InterPro:   IPR020070 [H]

Pfam domain/function: PF03948 Ribosomal_L9_C; PF01281 Ribosomal_L9_N [H]

EC number: NA

Molecular weight: Translated: 16411; Mature: 16411

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00651 RIBOSOMAL_L9

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNARTEKLLVKRKQQIEIEKQEK
CEEEEEEECCCCCCCEEEECCCCCCHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
QEQIAKLKIEIEKLVLWFKLKGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTF
HHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEHHHHHHCCCCCC
GTSFVDIKLSSQTIAKLKINITKDE
CCEEEEEEECCCEEEEEEEEEECCC
>Mature Secondary Structure
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNARTEKLLVKRKQQIEIEKQEK
CEEEEEEECCCCCCCEEEECCCCCCHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
QEQIAKLKIEIEKLVLWFKLKGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTF
HHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEHHHHHHCCCCCC
GTSFVDIKLSSQTIAKLKINITKDE
CCEEEEEEECCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA