| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is rbfA
Identifier: 71893933
GI number: 71893933
Start: 753503
End: 753832
Strand: Reverse
Name: rbfA
Synonym: MHJ_0584
Alternate gene names: NA
Gene position: 753832-753503 (Counterclockwise)
Preceding gene: 71893934
Following gene: 71893932
Centisome position: 84.0
GC content: 27.58
Gene sequence:
>330_bases ATGTCTGTTAGTCACGAGAAAAAACAAAATTATTACTTTCAAATTATTTCAAAAGTAATCGAGACATATTTTCTAGAAAG GATGCCGGTTTCTGTTAATTGAGTTCGACTTTCAGCAGATAATTCCCATCTTTTTGTTTATTTAGAGTTTCAGTTTAGTC AAAGAAAAAATTTAGCTAAAATTATCAAAGCGGAAAAATTTATTAGGCTTAAATTTGGCAATCTCCTTGAAGGTTTTAAA GTTCCACAACTCCATTTTTTACTAGATCCAGTTGTAGAAAGAGTAGAAAAAATTGATAAAATATTTAGTGAAATTCAAAA AGAAAAGTAA
Upstream 100 bases:
>100_bases ACGAGTTTGGAACTCATATCTATAAATTTAATGATATTGAAATAGGTGATGAGCTAAAAGCATTTTTAGATGTTGAAATT GAGGAATAAAAAGGAAGAGA
Downstream 100 bases:
>100_bases AAAAAGCACATAAAAAACGCTTTTTTTACTTTTAATATTTAACCAAAGATATGCAATTAATTAATTTACATACAAGAACT GAATACACATTTTTATCATC
Product: ribosome-binding factor A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSVSHEKKQNYYFQIISKVIETYFLERMPVSVNWVRLSADNSHLFVYLEFQFSQRKNLAKIIKAEKFIRLKFGNLLEGFK VPQLHFLLDPVVERVEKIDKIFSEIQKEK
Sequences:
>Translated_109_residues MSVSHEKKQNYYFQIISKVIETYFLERMPVSVN*VRLSADNSHLFVYLEFQFSQRKNLAKIIKAEKFIRLKFGNLLEGFK VPQLHFLLDPVVERVEKIDKIFSEIQKEK >Mature_108_residues SVSHEKKQNYYFQIISKVIETYFLERMPVSVN*VRLSADNSHLFVYLEFQFSQRKNLAKIIKAEKFIRLKFGNLLEGFKV PQLHFLLDPVVERVEKIDKIFSEIQKEK
Specific function: Unknown
COG id: COG0858
COG function: function code J; Ribosome-binding factor A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12892; Mature: 12761
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSHEKKQNYYFQIISKVIETYFLERMPVSVNVRLSADNSHLFVYLEFQFSQRKNLAKI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHH IKAEKFIRLKFGNLLEGFKVPQLHFLLDPVVERVEKIDKIFSEIQKEK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVSHEKKQNYYFQIISKVIETYFLERMPVSVNVRLSADNSHLFVYLEFQFSQRKNLAKI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHH IKAEKFIRLKFGNLLEGFKVPQLHFLLDPVVERVEKIDKIFSEIQKEK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA