| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893380
Identifier: 71893380
GI number: 71893380
Start: 24893
End: 25570
Strand: Reverse
Name: 71893380
Synonym: MHJ_0021
Alternate gene names: NA
Gene position: 25570-24893 (Counterclockwise)
Preceding gene: 71893386
Following gene: 71893379
Centisome position: 2.85
GC content: 31.56
Gene sequence:
>678_bases ATTAAAAATGCAAGTTCAATAGCTTCTACAATTTTTTCCTCTGCTCTGGACCCATTTAAATCGTTAAGTTCATTCGCGCT AGCCCAAAAATATGTAGATGATAAATATTTAAAAATTGAACAAGATAATTACGCAGGGGAAATCTCGCTTCTCGGAGCAA AATCCATAGTTTATTTTGGTGGATTATTTTGGGAAGATAAAGTTGCATGAGCAAGTAATTTAACAGTAAAACATCAAAAA AAAGTAAGTCCATATTATATAACAAGTAAGCCAAAATATATTGAAGCAACCTTAAAAACTTGAACCTCGGGCTTAGGTAG CCCTTCCTTTGAGGTAGGCGGGGAAATAAAATATAATGGTAATTTCAGATCTAATTTAGGTATAAAAATTGGAATAGATT ATGGAACTAGAGAATTATTTATTACTAAAAGTGTTCAAAACCTACCACAAGCTAAAATAACTTATGCGGGTACGGGTTGG AGATACAAAGTAACTTCATATGGGCAATATGGAGTAGGAGCAATAGAAACTGAAGATGAATTTTTAATGTTTAATACTGA AAATTCAATGATTACAACACGACGAAAAAGAAAACCTAAAACATCATTTCCTGATATTTTAGGTCGTTATATCGAAGAAA AATACGGGCATTTACCTGAAGAAGATGATAATAATTAA
Upstream 100 bases:
>100_bases CGGAATTTTTGGTTCTTTATGTACAATTCTTACAACAACCACAACAACAATTTCTATTAGAAATGAAAATGCAAACGGGT TTTATTCGGGCAAAGAAAAT
Downstream 100 bases:
>100_bases TAACTTAAGTAAAAAGTTTGAAACTAAATCGATTTTTGAAAAAATTAATTTAGAAATTCCCACAAACAAACTAACTTTTG TAGTTGGCGAATCTGGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKNASSIASTIFSSALDPFKSLSSFALAQKYVDDKYLKIEQDNYAGEISLLGAKSIVYFGGLFWEDKVAWASNLTVKHQK KVSPYYITSKPKYIEATLKTWTSGLGSPSFEVGGEIKYNGNFRSNLGIKIGIDYGTRELFITKSVQNLPQAKITYAGTGW RYKVTSYGQYGVGAIETEDEFLMFNTENSMITTRRKRKPKTSFPDILGRYIEEKYGHLPEEDDNN
Sequences:
>Translated_225_residues MKNASSIASTIFSSALDPFKSLSSFALAQKYVDDKYLKIEQDNYAGEISLLGAKSIVYFGGLFWEDKVA*ASNLTVKHQK KVSPYYITSKPKYIEATLKT*TSGLGSPSFEVGGEIKYNGNFRSNLGIKIGIDYGTRELFITKSVQNLPQAKITYAGTGW RYKVTSYGQYGVGAIETEDEFLMFNTENSMITTRRKRKPKTSFPDILGRYIEEKYGHLPEEDDNN >Mature_225_residues MKNASSIASTIFSSALDPFKSLSSFALAQKYVDDKYLKIEQDNYAGEISLLGAKSIVYFGGLFWEDKVA*ASNLTVKHQK KVSPYYITSKPKYIEATLKT*TSGLGSPSFEVGGEIKYNGNFRSNLGIKIGIDYGTRELFITKSVQNLPQAKITYAGTGW RYKVTSYGQYGVGAIETEDEFLMFNTENSMITTRRKRKPKTSFPDILGRYIEEKYGHLPEEDDNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24971; Mature: 24971
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNASSIASTIFSSALDPFKSLSSFALAQKYVDDKYLKIEQDNYAGEISLLGAKSIVYFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEEEEC GLFWEDKVAASNLTVKHQKKVSPYYITSKPKYIEATLKTTSGLGSPSFEVGGEIKYNGNF CEEECCCCCCCCCEEEHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC RSNLGIKIGIDYGTRELFITKSVQNLPQAKITYAGTGWRYKVTSYGQYGVGAIETEDEFL CCCCCEEEEECCCCEEEEEECCHHHCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCEE MFNTENSMITTRRKRKPKTSFPDILGRYIEEKYGHLPEEDDNN EEECCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKNASSIASTIFSSALDPFKSLSSFALAQKYVDDKYLKIEQDNYAGEISLLGAKSIVYFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEEEEC GLFWEDKVAASNLTVKHQKKVSPYYITSKPKYIEATLKTTSGLGSPSFEVGGEIKYNGNF CEEECCCCCCCCCEEEHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC RSNLGIKIGIDYGTRELFITKSVQNLPQAKITYAGTGWRYKVTSYGQYGVGAIETEDEFL CCCCCEEEEECCCCEEEEEECCHHHCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCEE MFNTENSMITTRRKRKPKTSFPDILGRYIEEKYGHLPEEDDNN EEECCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA