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The map label for this gene is hlpA

Identifier: 71892062

GI number: 71892062

Start: 335405

End: 335905

Strand: Direct

Name: hlpA

Synonym: BPEN_288

Alternate gene names: 71892062

Gene position: 335405-335905 (Clockwise)

Preceding gene: 71892061

Following gene: 71892063

Centisome position: 42.37

GC content: 31.54

Gene sequence:

>501_bases
GTGAAAAAGTGGACATATATATTAAGTATGGTGATTTGGATAACACAAATTAGCCCTGTTGATGCTGAGGATAAAATTGC
GATAGTTAATATTTCTAATATTTTCCAACAATCTTCACAACGCGCGAAAATCATTAAACAACTTGAATATGAATTTAAAG
ATCGTGCTACCGAATTAGAAAAGATGGAGCACGATTTACAAATGAAAATACAAACATTACAACGAGATGGTGCTACCATG
AAAACAATCGAGCGTAGTGAATTAGAAAAATCGTTAATAAATCAACGTGAAATTTTCTCTAACAAAGCTAAAGAATTTCA
ACAAGAAAATCATTCACGTCAGACGGAAGAAAGAGATAAAATTCTGAATATGATTCAGAATGTGGTAACGAATGTTGCTA
AAAAAGAAAATTACGATATAGTAATCGACACTAATGCTGTACTGTATCACAGTATTCGTGTTACGGATATTACCAATTCT
GTAATGAAACAAGTTGGATAA

Upstream 100 bases:

>100_bases
AGTATCGGAAAAACATGGTAAAATTTAGGTGCAGTATAGAAATAACAAATATCTTATCAAAGTATAAACTTTTATATTTT
ATTAAACTAAGAGGTTTACA

Downstream 100 bases:

>100_bases
GTTATGATCGAAATGCGATTATCTGATCTAGCACAACAGTTAAATGCTAAATTACATGGAGATGAAAATATTATTATTAC
TGGTGTTGCTTCTATAAATA

Product: histone-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKKWTYILSMVIWITQISPVDAEDKIAIVNISNIFQQSSQRAKIIKQLEYEFKDRATELEKMEHDLQMKIQTLQRDGATM
KTIERSELEKSLINQREIFSNKAKEFQQENHSRQTEERDKILNMIQNVVTNVAKKENYDIVIDTNAVLYHSIRVTDITNS
VMKQVG

Sequences:

>Translated_166_residues
MKKWTYILSMVIWITQISPVDAEDKIAIVNISNIFQQSSQRAKIIKQLEYEFKDRATELEKMEHDLQMKIQTLQRDGATM
KTIERSELEKSLINQREIFSNKAKEFQQENHSRQTEERDKILNMIQNVVTNVAKKENYDIVIDTNAVLYHSIRVTDITNS
VMKQVG
>Mature_166_residues
MKKWTYILSMVIWITQISPVDAEDKIAIVNISNIFQQSSQRAKIIKQLEYEFKDRATELEKMEHDLQMKIQTLQRDGATM
KTIERSELEKSLINQREIFSNKAKEFQQENHSRQTEERDKILNMIQNVVTNVAKKENYDIVIDTNAVLYHSIRVTDITNS
VMKQVG

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family

Homologues:

Organism=Escherichia coli, GI1786375, Length=166, Percent_Identity=43.3734939759036, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): SKP_BLOPB (Q493C3)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277792.1
- ProteinModelPortal:   Q493C3
- SMR:   Q493C3
- STRING:   Q493C3
- GeneID:   3562597
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_288
- eggNOG:   COG2825
- HOGENOM:   HBG495360
- OMA:   AVYVNPR
- ProtClustDB:   CLSK280786
- BioCyc:   CBLO291272:BPEN_288-MONOMER
- InterPro:   IPR005632
- SMART:   SM00935

Pfam domain/function: PF03938 OmpH; SSF111384 OM_chaperone_Skp/OmpH

EC number: NA

Molecular weight: Translated: 19506; Mature: 19506

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWTYILSMVIWITQISPVDAEDKIAIVNISNIFQQSSQRAKIIKQLEYEFKDRATELE
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMEHDLQMKIQTLQRDGATMKTIERSELEKSLINQREIFSNKAKEFQQENHSRQTEERDK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ILNMIQNVVTNVAKKENYDIVIDTNAVLYHSIRVTDITNSVMKQVG
HHHHHHHHHHHHHHCCCCCEEEECCCEEHHEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKWTYILSMVIWITQISPVDAEDKIAIVNISNIFQQSSQRAKIIKQLEYEFKDRATELE
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMEHDLQMKIQTLQRDGATMKTIERSELEKSLINQREIFSNKAKEFQQENHSRQTEERDK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ILNMIQNVVTNVAKKENYDIVIDTNAVLYHSIRVTDITNSVMKQVG
HHHHHHHHHHHHHHCCCCCEEEECCCEEHHEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA