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The map label for this gene is secY [H]

Identifier: 71891994

GI number: 71891994

Start: 252382

End: 253719

Strand: Direct

Name: secY [H]

Synonym: BPEN_218

Alternate gene names: 71891994

Gene position: 252382-253719 (Clockwise)

Preceding gene: 71891993

Following gene: 71891995

Centisome position: 31.88

GC content: 32.81

Gene sequence:

>1338_bases
ATGATGACAATTACTAATAAACAACGATCTAGATCTACTTTTCAAAGTATCAAAGGAGGATTAGGTGACTTGAAACGTAG
AATTATGTTTGTGATTGGCGCTTTAATCATTTTTCGTATGGGATCATTTATTCCAATTCCAGGAGTAGATTTGATTGTTT
TGGCACAAATTATTGAACAACAACATGGCACTATTATTGAAATGTTTAATATGTTTTCTGGAGGATCTTTAAGTCGTGCT
TCTATTTTTAGTTTAGGGATTATGCCATATATTTCAGCTTCAATTATTGTTCAGCTATTAACTGCGGTACACCCTGCTTT
AATAGAAATTAAAAAAGAAGGAGAAAGTGGCAGGAGAATAATTAACCAGTATATTCGTTATGGAACTTTAATACTTGGAA
TACTACAATCAGTAGGCGTTGTCACTAGTTTACCTAATGTATCGGGGTTAGTGATTAATCCAGGATTTTCCTTTTATTGC
ATAGCAATTATCAGTCTTGTTTGTGGTACTGTTTTTTTAATGTGGTTAGGTGATCAAATCACTAGTAGAGGTATAGGAAA
TGGTATTTCAATTATTATTTTTTCAGGGATAATTGCCGGGTTGCCACTGGCTATAGGCCATACCATAGAACAAGTGAGAC
AAGATGAGTTACATTTTTTTATATTAATTTTAATTATTTTCTTGGTATTGAGCGTTACTTTTTTTGTTGTATTTATGGAG
CGGGGACAACGTCGCATTCTAGTACATTATGCTCAACGTCAACAAGGTCGTCGTATTTATGCTGCTCAAAGCACACATTT
ACCACTGAAAGTAAATATGGCTGGTGTCATTCCTGCTATTTTTGCTTCTAGTGTCATCTTGTTTCCGGGTACTGTAATTT
CTTGGTTCGGCAGTAGTACTAATTGGCAATGGTTAGCTATTATTTCTTTATATCTACAACCAGGTCAGCCATTATATATT
TTACTTTATGCGGCAGCTATTATGTTTTTTTGTTTTTTTTACACATCTTTAATTTTTAATCCTCGCGAAACAGCTGAAAA
TTTAAAAAAATCGGGAGCATTTGTTCCTGGAATTAGACCGGGAGAACAAACTGCAAAATATATTAATACAATTATGATTC
GTTTGACTTTCATTGGTGCAATGTACGTTACATTTATTTGTTTAGTACCAGAGTTTATGAGAATTGCTATGAAAGTTCCT
TTCTATTTTGGAGGAACATCTTTACTTATTGTAGTTGTAGTAATTATGGATTTTATGGCGCAAATACAAACTTTAATGAT
GTCTAGTAAATATGAATCTGTGCTTAAAAAAGCAAACCTGAAACATTTTAATCATTGA

Upstream 100 bases:

>100_bases
ATTAAACGTCCTATCACGATACGTAAATTACGCGTTAGTAAAGGAGCGCGTGCTGCAATTCAATCTATAGGCGGTCAAAT
AGAGGAGTAATTGAATTAAA

Downstream 100 bases:

>100_bases
TTAAAAAAAATCATATACATATGATTATAGGAAACATTATGAAAGTACGTACGTCAGTGAAAAAATTATGTCGTTATTGT
GAAATTGTGAAGAGACATAA

Product: preprotein translocase, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MMTITNKQRSRSTFQSIKGGLGDLKRRIMFVIGALIIFRMGSFIPIPGVDLIVLAQIIEQQHGTIIEMFNMFSGGSLSRA
SIFSLGIMPYISASIIVQLLTAVHPALIEIKKEGESGRRIINQYIRYGTLILGILQSVGVVTSLPNVSGLVINPGFSFYC
IAIISLVCGTVFLMWLGDQITSRGIGNGISIIIFSGIIAGLPLAIGHTIEQVRQDELHFFILILIIFLVLSVTFFVVFME
RGQRRILVHYAQRQQGRRIYAAQSTHLPLKVNMAGVIPAIFASSVILFPGTVISWFGSSTNWQWLAIISLYLQPGQPLYI
LLYAAAIMFFCFFYTSLIFNPRETAENLKKSGAFVPGIRPGEQTAKYINTIMIRLTFIGAMYVTFICLVPEFMRIAMKVP
FYFGGTSLLIVVVVIMDFMAQIQTLMMSSKYESVLKKANLKHFNH

Sequences:

>Translated_445_residues
MMTITNKQRSRSTFQSIKGGLGDLKRRIMFVIGALIIFRMGSFIPIPGVDLIVLAQIIEQQHGTIIEMFNMFSGGSLSRA
SIFSLGIMPYISASIIVQLLTAVHPALIEIKKEGESGRRIINQYIRYGTLILGILQSVGVVTSLPNVSGLVINPGFSFYC
IAIISLVCGTVFLMWLGDQITSRGIGNGISIIIFSGIIAGLPLAIGHTIEQVRQDELHFFILILIIFLVLSVTFFVVFME
RGQRRILVHYAQRQQGRRIYAAQSTHLPLKVNMAGVIPAIFASSVILFPGTVISWFGSSTNWQWLAIISLYLQPGQPLYI
LLYAAAIMFFCFFYTSLIFNPRETAENLKKSGAFVPGIRPGEQTAKYINTIMIRLTFIGAMYVTFICLVPEFMRIAMKVP
FYFGGTSLLIVVVVIMDFMAQIQTLMMSSKYESVLKKANLKHFNH
>Mature_445_residues
MMTITNKQRSRSTFQSIKGGLGDLKRRIMFVIGALIIFRMGSFIPIPGVDLIVLAQIIEQQHGTIIEMFNMFSGGSLSRA
SIFSLGIMPYISASIIVQLLTAVHPALIEIKKEGESGRRIINQYIRYGTLILGILQSVGVVTSLPNVSGLVINPGFSFYC
IAIISLVCGTVFLMWLGDQITSRGIGNGISIIIFSGIIAGLPLAIGHTIEQVRQDELHFFILILIIFLVLSVTFFVVFME
RGQRRILVHYAQRQQGRRIYAAQSTHLPLKVNMAGVIPAIFASSVILFPGTVISWFGSSTNWQWLAIISLYLQPGQPLYI
LLYAAAIMFFCFFYTSLIFNPRETAENLKKSGAFVPGIRPGEQTAKYINTIMIRLTFIGAMYVTFICLVPEFMRIAMKVP
FYFGGTSLLIVVVVIMDFMAQIQTLMMSSKYESVLKKANLKHFNH

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=435, Percent_Identity=77.9310344827586, Blast_Score=665, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49627; Mature: 49627

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]