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The map label for this gene is ssb [H]

Identifier: 71891820

GI number: 71891820

Start: 34030

End: 34521

Strand: Direct

Name: ssb [H]

Synonym: BPEN_028

Alternate gene names: 71891820

Gene position: 34030-34521 (Clockwise)

Preceding gene: 71891819

Following gene: 71891821

Centisome position: 4.3

GC content: 36.18

Gene sequence:

>492_bases
ATGAATGGAGGAGTTGTGGCTAATAGGGGAATTAATAAAGTTATTTTAATAGGGTATCTCGGTCAGGAGCCAGCAGTTCG
TTATATGTCTAGTGGTAGTATGGTTACTAATATTTCAGTAGCTACTACTGAATCCTGGAAAGATAAACAAACTAACGAAT
TTAAAGAAAAAACTGAGTGGCATCGTGTGGTGTTATTTGGGAAATTAGCAGAAATTGCATCAGAATATCTGCATAAAGGT
TCTCAGGTATATATTGAAGGATCGTTAAAAACTAGAAAATGGCAAAATCAAAATGGACAAGATCGGTATATTACTGAAAT
TATTGTTAATATCGGAGGCGCAATGCAAATGTTGGGTAGTCGTCATTCAGGAGAAAATGTATCGTTAGATAATCAGAATG
TAATGAATAGCGGCGATAAAACCATATCGAATGATGTATCAGTGGGTGACCCGGCCGATGTTAATTTCGATGACGAGGAT
ATTCCTTTTTAG

Upstream 100 bases:

>100_bases
TAATATTGATTTTTATTTAAGTATATTAAATATACGGGTTTATTAAACGGCAATAGCGTGATTACGTTAATAAAATATTA
AAAATAAACCATACGATGTA

Downstream 100 bases:

>100_bases
ATGGGTTAAATGTATTAAAAATTAATGAGTCATTTTCATTATTGTATAGGCGGTATAGGTTGGATTTTTCAATAATTATT
TTTTACGTTCATATACACTT

Product: ssDNA-binding protein controls activity of RecBCD nuclease

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTEWHRVVLFGKLAEIASEYLHKG
SQVYIEGSLKTRKWQNQNGQDRYITEIIVNIGGAMQMLGSRHSGENVSLDNQNVMNSGDKTISNDVSVGDPADVNFDDED
IPF

Sequences:

>Translated_163_residues
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTEWHRVVLFGKLAEIASEYLHKG
SQVYIEGSLKTRKWQNQNGQDRYITEIIVNIGGAMQMLGSRHSGENVSLDNQNVMNSGDKTISNDVSVGDPADVNFDDED
IPF
>Mature_163_residues
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTEWHRVVLFGKLAEIASEYLHKG
SQVYIEGSLKTRKWQNQNGQDRYITEIIVNIGGAMQMLGSRHSGENVSLDNQNVMNSGDKTISNDVSVGDPADVNFDDED
IPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=33.6283185840708, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=119, Percent_Identity=70.5882352941177, Blast_Score=189, Evalue=5e-50,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18072; Mature: 18072

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTEW
CCCCEECCCCCCEEEEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH
HRVVLFGKLAEIASEYLHKGSQVYIEGSLKTRKWQNQNGQDRYITEIIVNIGGAMQMLGS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCC
RHSGENVSLDNQNVMNSGDKTISNDVSVGDPADVNFDDEDIPF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTEW
CCCCEECCCCCCEEEEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH
HRVVLFGKLAEIASEYLHKGSQVYIEGSLKTRKWQNQNGQDRYITEIIVNIGGAMQMLGS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCC
RHSGENVSLDNQNVMNSGDKTISNDVSVGDPADVNFDDEDIPF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]