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The map label for this gene is dnaQ

Identifier: 68537098

GI number: 68537098

Start: 2338512

End: 2340305

Strand: Direct

Name: dnaQ

Synonym: jk2003

Alternate gene names: NA

Gene position: 2338512-2340305 (Clockwise)

Preceding gene: 161986615

Following gene: 68537101

Centisome position: 94.96

GC content: 67.73

Gene sequence:

>1794_bases
ATGAACGAGAACGATCACTCGGCCGCCCCCGGCCCCGAGCACACCGGCGCGCGCCGCCCAAGGCGCCCGCGCCGCAGGGT
GACTCGCCCTGCAGGTTCTCTCGCTGTTTCTTTTTCTGACGCTAGTACTTCGGACGCCCACTCCCCCGCCCAGAACCACT
CCCCCGCAGGAGCCGAGAGGCACTCCGAGCCAGTAGCAACCCCCGAGTTCCAAGCTGCCACGGATTCCCACGGCGGCGAC
GGGAGCGCAAGCGCTTCCGGCGGGAACTCCAGCGAGGGCAACGACCACTCGAGCCCCCGAGAGGAGCTCGAGTCCGCTCT
GCATGACCTCCCCTCCAAGGAGGAGGCCCCCTTTGCGGCCGTGAGCATCTCCACCTCCGGCATTCACCCGAAAACCTCCC
GGCTGGTGGCGCTTTCCGTAGTCTTCTTCGGCCCCGGCGCGGAAGCCCCCGGCGACGTTGCAAACGCCGATGAACTGCCG
ACTATCAACATCGGCCAGGAAGTCGGCGCCCTGACCCGCCACCTCAACCCCGGCGAGGACGCCGGCCCCTGGCACCTCCA
CGGCTACCAGGTCAACGAGCTCTCCCAGGCACTGGGCTTCAATTCCAGCGCGCAGCTGATCCACCAGGCCTTGGACGGAC
GCACGCTCATCATGCATGAGTCCGATTACGTGTGGGGCTTCATCACCCACGAGTTCAAACTGTCGCAGCGCTCCGCGAAC
CGCGGCCGGCGCAGCCGCGGGCGCGGTCGCGGCGGTCGGCGCCAGCCAACCCCCGCACCGGTCTCCATCATCGACACACT
CGCCACCGCACGACGCCAAGCGATCGACTCTACCGACCCCCGCCTGCGCGCCATCGTCACCAGCTACAACCGCGCCGCCG
ACACGACTGCCGGCGACCCTGCCGCCGGCGACGCTCCCGCAAACGCCAGCCGGTCCGCCGTGCTGGCCCCTGCGGCGGCG
CTGCCAGAGGTGGGGGCTGCGGCGTCACTAAGTAAAAAAGACATCGACCCCGACGAGCTGCTCGAGGCGAACGCGCGCCT
CACCGCCGCCCTCGCCCTCGCGCAGCAGCGCAACGGCGAGCTGACCGTGCTGGACCCCGAGGATCTTGCGGCCGATCAAT
TTGGGCTGCGGCGTAGTGGCCTTCGTATTGACGCCGCCAACTCTCCCCGCCCATACGTAAACCCCGGGGCGTGGAAGCGC
GGGGAGCCGCTGGTCGAAGGTATGGAATTTGTGGTCAGCCCGGATGTGGAGGTCGACCCGGACGTGCTGATCGGCCAGGG
TGTTGCTGCGGGGCTGGCATATAGCGAGAAGCTGAATCGTCGCAGCTCGCTGGTGGTGTGTAATGAAAACTACGAGCTGC
GGGGCAAGGCGATGCACGCCGACCGGAAGAACATTCCCCTGATTCGGGATGAGGACTTCCTGGCTCTGCTGAATAACGTG
CAGCCCGGCGAGAAGGAGGCCGTTCCGACGAAGCCGGGTGCGGACGCGCGCCCGCGGACCAGCGGCTTGGCCGGCCCGCG
TGGCGAGTCTGGCTCTGGCGGACACGGCTCTAGCGGCTCTGGCTCTGGCGGCTCTGGCAGGTCAGATGGGCGCGGCTCTG
GCTCGGGCAAATCCGGCAAGTCTAAGAAGTCGAACAAGAACGGTCGCTCCAACAACTCCGCCCACAAGGGCAATGCAAAC
CCCGGCGGCCACGAGGGGAAGATCCCGGGGCCCAGTGGCAAGCGAAATCGTCGGAGGCGTCGGCGCCGCAAGAGTTCCGG
GGGCTCCAGGGGCTCCACCAACGGCGGAAACTAG

Upstream 100 bases:

>100_bases
CGCAGGATGCCGCCGCTGGGGTTTCCCAGGGAGTCTAGGGTCCCGGGAACCGCGCAGGCTGCCAGCGGGGCGCGGTTCCC
CGCTGGGTAGTATGTAGTCC

Downstream 100 bases:

>100_bases
CCCGGCGTACCTCGCCCCCCCTTCGAAGGCGCCGGAGCTGGGAGGCGGCAGAGCGTCAATGTCCAAAATCTACGAGTTAT
TAAAAGTAGCTCATCTGCAG

Product: DNA polymerase III, epsilon subunit

Products: NA

Alternate protein names: DNA Polymerase III Epsilon Subunit

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MNENDHSAAPGPEHTGARRPRRPRRRVTRPAGSLAVSFSDASTSDAHSPAQNHSPAGAERHSEPVATPEFQAATDSHGGD
GSASASGGNSSEGNDHSSPREELESALHDLPSKEEAPFAAVSISTSGIHPKTSRLVALSVVFFGPGAEAPGDVANADELP
TINIGQEVGALTRHLNPGEDAGPWHLHGYQVNELSQALGFNSSAQLIHQALDGRTLIMHESDYVWGFITHEFKLSQRSAN
RGRRSRGRGRGGRRQPTPAPVSIIDTLATARRQAIDSTDPRLRAIVTSYNRAADTTAGDPAAGDAPANASRSAVLAPAAA
LPEVGAAASLSKKDIDPDELLEANARLTAALALAQQRNGELTVLDPEDLAADQFGLRRSGLRIDAANSPRPYVNPGAWKR
GEPLVEGMEFVVSPDVEVDPDVLIGQGVAAGLAYSEKLNRRSSLVVCNENYELRGKAMHADRKNIPLIRDEDFLALLNNV
QPGEKEAVPTKPGADARPRTSGLAGPRGESGSGGHGSSGSGSGGSGRSDGRGSGSGKSGKSKKSNKNGRSNNSAHKGNAN
PGGHEGKIPGPSGKRNRRRRRRRKSSGGSRGSTNGGN

Sequences:

>Translated_597_residues
MNENDHSAAPGPEHTGARRPRRPRRRVTRPAGSLAVSFSDASTSDAHSPAQNHSPAGAERHSEPVATPEFQAATDSHGGD
GSASASGGNSSEGNDHSSPREELESALHDLPSKEEAPFAAVSISTSGIHPKTSRLVALSVVFFGPGAEAPGDVANADELP
TINIGQEVGALTRHLNPGEDAGPWHLHGYQVNELSQALGFNSSAQLIHQALDGRTLIMHESDYVWGFITHEFKLSQRSAN
RGRRSRGRGRGGRRQPTPAPVSIIDTLATARRQAIDSTDPRLRAIVTSYNRAADTTAGDPAAGDAPANASRSAVLAPAAA
LPEVGAAASLSKKDIDPDELLEANARLTAALALAQQRNGELTVLDPEDLAADQFGLRRSGLRIDAANSPRPYVNPGAWKR
GEPLVEGMEFVVSPDVEVDPDVLIGQGVAAGLAYSEKLNRRSSLVVCNENYELRGKAMHADRKNIPLIRDEDFLALLNNV
QPGEKEAVPTKPGADARPRTSGLAGPRGESGSGGHGSSGSGSGGSGRSDGRGSGSGKSGKSKKSNKNGRSNNSAHKGNAN
PGGHEGKIPGPSGKRNRRRRRRRKSSGGSRGSTNGGN
>Mature_597_residues
MNENDHSAAPGPEHTGARRPRRPRRRVTRPAGSLAVSFSDASTSDAHSPAQNHSPAGAERHSEPVATPEFQAATDSHGGD
GSASASGGNSSEGNDHSSPREELESALHDLPSKEEAPFAAVSISTSGIHPKTSRLVALSVVFFGPGAEAPGDVANADELP
TINIGQEVGALTRHLNPGEDAGPWHLHGYQVNELSQALGFNSSAQLIHQALDGRTLIMHESDYVWGFITHEFKLSQRSAN
RGRRSRGRGRGGRRQPTPAPVSIIDTLATARRQAIDSTDPRLRAIVTSYNRAADTTAGDPAAGDAPANASRSAVLAPAAA
LPEVGAAASLSKKDIDPDELLEANARLTAALALAQQRNGELTVLDPEDLAADQFGLRRSGLRIDAANSPRPYVNPGAWKR
GEPLVEGMEFVVSPDVEVDPDVLIGQGVAAGLAYSEKLNRRSSLVVCNENYELRGKAMHADRKNIPLIRDEDFLALLNNV
QPGEKEAVPTKPGADARPRTSGLAGPRGESGSGGHGSSGSGSGGSGRSDGRGSGSGKSGKSKKSNKNGRSNNSAHKGNAN
PGGHEGKIPGPSGKRNRRRRRRRKSSGGSRGSTNGGN

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62377; Mature: 62377

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENDHSAAPGPEHTGARRPRRPRRRVTRPAGSLAVSFSDASTSDAHSPAQNHSPAGAER
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHH
HSEPVATPEFQAATDSHGGDGSASASGGNSSEGNDHSSPREELESALHDLPSKEEAPFAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE
VSISTSGIHPKTSRLVALSVVFFGPGAEAPGDVANADELPTINIGQEVGALTRHLNPGED
EEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCC
AGPWHLHGYQVNELSQALGFNSSAQLIHQALDGRTLIMHESDYVWGFITHEFKLSQRSAN
CCCEEECCEEHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEHHHHHHH
RGRRSRGRGRGGRRQPTPAPVSIIDTLATARRQAIDSTDPRLRAIVTSYNRAADTTAGDP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
AAGDAPANASRSAVLAPAAALPEVGAAASLSKKDIDPDELLEANARLTAALALAQQRNGE
CCCCCCCCCCCCEEECCHHHCCCCCCHHHCHHCCCCHHHHHHHCCHHHHHHHHHHHCCCC
LTVLDPEDLAADQFGLRRSGLRIDAANSPRPYVNPGAWKRGEPLVEGMEFVVSPDVEVDP
EEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCC
DVLIGQGVAAGLAYSEKLNRRSSLVVCNENYELRGKAMHADRKNIPLIRDEDFLALLNNV
CEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCEEECCCCCCCCEECCCHHHHHHHCC
QPGEKEAVPTKPGADARPRTSGLAGPRGESGSGGHGSSGSGSGGSGRSDGRGSGSGKSGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SKKSNKNGRSNNSAHKGNANPGGHEGKIPGPSGKRNRRRRRRRKSSGGSRGSTNGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNENDHSAAPGPEHTGARRPRRPRRRVTRPAGSLAVSFSDASTSDAHSPAQNHSPAGAER
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHH
HSEPVATPEFQAATDSHGGDGSASASGGNSSEGNDHSSPREELESALHDLPSKEEAPFAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEE
VSISTSGIHPKTSRLVALSVVFFGPGAEAPGDVANADELPTINIGQEVGALTRHLNPGED
EEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCC
AGPWHLHGYQVNELSQALGFNSSAQLIHQALDGRTLIMHESDYVWGFITHEFKLSQRSAN
CCCEEECCEEHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEHHHHHHH
RGRRSRGRGRGGRRQPTPAPVSIIDTLATARRQAIDSTDPRLRAIVTSYNRAADTTAGDP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
AAGDAPANASRSAVLAPAAALPEVGAAASLSKKDIDPDELLEANARLTAALALAQQRNGE
CCCCCCCCCCCCEEECCHHHCCCCCCHHHCHHCCCCHHHHHHHCCHHHHHHHHHHHCCCC
LTVLDPEDLAADQFGLRRSGLRIDAANSPRPYVNPGAWKRGEPLVEGMEFVVSPDVEVDP
EEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCCC
DVLIGQGVAAGLAYSEKLNRRSSLVVCNENYELRGKAMHADRKNIPLIRDEDFLALLNNV
CEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCEEECCCCCCCCEECCCHHHHHHHCC
QPGEKEAVPTKPGADARPRTSGLAGPRGESGSGGHGSSGSGSGGSGRSDGRGSGSGKSGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SKKSNKNGRSNNSAHKGNANPGGHEGKIPGPSGKRNRRRRRRRKSSGGSRGSTNGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA