| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is serB [C]
Identifier: 68536997
GI number: 68536997
Start: 2219087
End: 2220514
Strand: Direct
Name: serB [C]
Synonym: jk1903
Alternate gene names: 68536997
Gene position: 2219087-2220514 (Clockwise)
Preceding gene: 68536974
Following gene: 68537003
Centisome position: 90.12
GC content: 63.52
Gene sequence:
>1428_bases ATGCACGCGGGCACAGGAGCCGCATGTCGAGCGGCTGATCAGCTGCACTCGCGCGGCTTGGGCTGGGGAAATACTGTCAG AGCTCATGGACGCCCATGCTACCCGCCCCACGGCTTTGGGCTTCGCACTCTCAGCAGGGGACTCTCCCCGCTTTCGGGTA ACTTTGTTTATGTGAATGAAGCGCCTGACCTAGAACCGTCGAACCGCCCCACCCCGGCTCCTAGCCGGAATGTGGGCGAG CGTGCGGAGTTTTGGGCGGAATTGCGTGATATTGGCAGCGAATGGCGTGGATACCTGCGTGCGCTTTCCTTGACCGCGCA GTCCTTCCTCCGCGAGTTCCGAGAGGAGCGCTTCGGAAAACCCAGCCACGAAGAACGCTCAGGCGATACTGAGCCTGCAG CTGTGGAGAAGGTGGCGTCCCGCCCAAAGAAGCAGGGCCACCCCACATCCACAGCGCAGAACATTCAGGTTGGGTACGGC ACCGGCGCCCCACGAGCACTCTGGGAGCTCAGCGAGACACAGCTGGACCAGCTGGCGCACAGCTACGAGATCGAAGGCGA CCAGCTGCGTACCGGACTGGCCAACCTGGAGGGCGCGGGGCTGTCAGCAGAGCACCCACGGCACCTGGACCACCCTGACC CTTCAATCCCGCAGGATGCCGGCGTTGGCGCTTTTTTCGACGTGGACAACACGCTGATCAAGGGTGCCTCGATCCTGCTT TTCGCCCGTGGCCTGGCGAAGAGGCGCTTCTTTACAGCCCGCCAGCTGCTGGGCTTCATTTGGGTGCAGATGAAGTTCCG GGCGCTGGGCAAGGAAAGCGCAGACGATATTGCCAGTGGCCGGGAGCAAGCGCTGGCGCTCGTTAAGGGGCGCAAAGAGT CCGAGGTTATCGAGATGGCCCAAGAGATCTGGGCGGCGACGATCGCGGAGCGCATCTTCCCGGACACCAAGGAGCTGGCT GACATGCACATTCAGGCTGGCCAGCAGGTGTGGCTAGTGACAGCCTCGCCGGTGCAGTTGGCGCAGATCATCGCTAAGGA ACTGGGGTTTACCGGCGCGCTTGGCACCGTGGCGGAGGTAAAGGATGGCCGCTTCACCGGGCGCATGGTCGGCCACATGC TGCACGGTGAGGAGAAAAAACACGCCGTTATCGCCCTGGCCAACCACGAAGGCCTGGATCTGGAGCGCTGCACTGCGTAC TCGGATTCCGTGAACGACCTGCCGATGCTTTCGACCGTTGGCACGGCCGTCGCGATTAACCCGGACTCCAAGCTACGCAA GGCCGCGCTGGAACGCGGCTGGGAGATCCGCGACTACCGGCGGATGCGTCGCGCACTCCGGCGCATCGGCGGAGCGTGGC TAGCTGTAGGGGTTGGATTGCTGGGCTTGGCTGGCGGCGCGGGAGTGTGGGCTTGGAAGCAGCGCTAG
Upstream 100 bases:
>100_bases CTTGTGCCAATTCCTCTTTTTCTTTGGTGACGCCACCACGGTCCAGCTCAATCACTTCCACGGTCGTGCCGAAGCGCTGT GCGATGGGCAAGATTTGCTG
Downstream 100 bases:
>100_bases GGCTGGCTAGAGCTCGCCAGGAACGCAAAAACCCACCGTGCCACGCCCTTTCGAAGGGCGCTTGCGGTGGGGTTCTTTCT ATATGCGGCAGCGGAAGGCT
Product: putative phosphoserine phosphatase
Products: L-serine; D-serine; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MHAGTGAACRAADQLHSRGLGWGNTVRAHGRPCYPPHGFGLRTLSRGLSPLSGNFVYVNEAPDLEPSNRPTPAPSRNVGE RAEFWAELRDIGSEWRGYLRALSLTAQSFLREFREERFGKPSHEERSGDTEPAAVEKVASRPKKQGHPTSTAQNIQVGYG TGAPRALWELSETQLDQLAHSYEIEGDQLRTGLANLEGAGLSAEHPRHLDHPDPSIPQDAGVGAFFDVDNTLIKGASILL FARGLAKRRFFTARQLLGFIWVQMKFRALGKESADDIASGREQALALVKGRKESEVIEMAQEIWAATIAERIFPDTKELA DMHIQAGQQVWLVTASPVQLAQIIAKELGFTGALGTVAEVKDGRFTGRMVGHMLHGEEKKHAVIALANHEGLDLERCTAY SDSVNDLPMLSTVGTAVAINPDSKLRKAALERGWEIRDYRRMRRALRRIGGAWLAVGVGLLGLAGGAGVWAWKQR
Sequences:
>Translated_475_residues MHAGTGAACRAADQLHSRGLGWGNTVRAHGRPCYPPHGFGLRTLSRGLSPLSGNFVYVNEAPDLEPSNRPTPAPSRNVGE RAEFWAELRDIGSEWRGYLRALSLTAQSFLREFREERFGKPSHEERSGDTEPAAVEKVASRPKKQGHPTSTAQNIQVGYG TGAPRALWELSETQLDQLAHSYEIEGDQLRTGLANLEGAGLSAEHPRHLDHPDPSIPQDAGVGAFFDVDNTLIKGASILL FARGLAKRRFFTARQLLGFIWVQMKFRALGKESADDIASGREQALALVKGRKESEVIEMAQEIWAATIAERIFPDTKELA DMHIQAGQQVWLVTASPVQLAQIIAKELGFTGALGTVAEVKDGRFTGRMVGHMLHGEEKKHAVIALANHEGLDLERCTAY SDSVNDLPMLSTVGTAVAINPDSKLRKAALERGWEIRDYRRMRRALRRIGGAWLAVGVGLLGLAGGAGVWAWKQR >Mature_475_residues MHAGTGAACRAADQLHSRGLGWGNTVRAHGRPCYPPHGFGLRTLSRGLSPLSGNFVYVNEAPDLEPSNRPTPAPSRNVGE RAEFWAELRDIGSEWRGYLRALSLTAQSFLREFREERFGKPSHEERSGDTEPAAVEKVASRPKKQGHPTSTAQNIQVGYG TGAPRALWELSETQLDQLAHSYEIEGDQLRTGLANLEGAGLSAEHPRHLDHPDPSIPQDAGVGAFFDVDNTLIKGASILL FARGLAKRRFFTARQLLGFIWVQMKFRALGKESADDIASGREQALALVKGRKESEVIEMAQEIWAATIAERIFPDTKELA DMHIQAGQQVWLVTASPVQLAQIIAKELGFTGALGTVAEVKDGRFTGRMVGHMLHGEEKKHAVIALANHEGLDLERCTAY SDSVNDLPMLSTVGTAVAINPDSKLRKAALERGWEIRDYRRMRRALRRIGGAWLAVGVGLLGLAGGAGVWAWKQR
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.3.3
Molecular weight: Translated: 51977; Mature: 51977
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAGTGAACRAADQLHSRGLGWGNTVRAHGRPCYPPHGFGLRTLSRGLSPLSGNFVYVNE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECC APDLEPSNRPTPAPSRNVGERAEFWAELRDIGSEWRGYLRALSLTAQSFLREFREERFGK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSHEERSGDTEPAAVEKVASRPKKQGHPTSTAQNIQVGYGTGAPRALWELSETQLDQLAH CCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH SYEIEGDQLRTGLANLEGAGLSAEHPRHLDHPDPSIPQDAGVGAFFDVDNTLIKGASILL HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH FARGLAKRRFFTARQLLGFIWVQMKFRALGKESADDIASGREQALALVKGRKESEVIEMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHH QEIWAATIAERIFPDTKELADMHIQAGQQVWLVTASPVQLAQIIAKELGFTGALGTVAEV HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHH KDGRFTGRMVGHMLHGEEKKHAVIALANHEGLDLERCTAYSDSVNDLPMLSTVGTAVAIN CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCEEEEC PDSKLRKAALERGWEIRDYRRMRRALRRIGGAWLAVGVGLLGLAGGAGVWAWKQR CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHAGTGAACRAADQLHSRGLGWGNTVRAHGRPCYPPHGFGLRTLSRGLSPLSGNFVYVNE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECC APDLEPSNRPTPAPSRNVGERAEFWAELRDIGSEWRGYLRALSLTAQSFLREFREERFGK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSHEERSGDTEPAAVEKVASRPKKQGHPTSTAQNIQVGYGTGAPRALWELSETQLDQLAH CCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH SYEIEGDQLRTGLANLEGAGLSAEHPRHLDHPDPSIPQDAGVGAFFDVDNTLIKGASILL HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH FARGLAKRRFFTARQLLGFIWVQMKFRALGKESADDIASGREQALALVKGRKESEVIEMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHH QEIWAATIAERIFPDTKELADMHIQAGQQVWLVTASPVQLAQIIAKELGFTGALGTVAEV HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHH KDGRFTGRMVGHMLHGEEKKHAVIALANHEGLDLERCTAYSDSVNDLPMLSTVGTAVAIN CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCEEEEC PDSKLRKAALERGWEIRDYRRMRRALRRIGGAWLAVGVGLLGLAGGAGVWAWKQR CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O
Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate
General reaction: phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]