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The map label for this gene is yvoA [H]

Identifier: 68536928

GI number: 68536928

Start: 2137632

End: 2138390

Strand: Direct

Name: yvoA [H]

Synonym: jk1838

Alternate gene names: 68536928

Gene position: 2137632-2138390 (Clockwise)

Preceding gene: 68536927

Following gene: 68536935

Centisome position: 86.81

GC content: 65.35

Gene sequence:

>759_bases
ATGCCCACCCGCTACGAGCAGATCGCCCGGCAGCTGCGCGAAGACATACGCAGTGGGCGCTTCCAGGTTGGCGAGCCCAT
TCCGAGCGAGAGGGCGCTGGCTGACCGCTTTGACGTCGCCCCCGGCACCATGCGTCAGGCACTCAATCAGCTCGTGGACG
AAGGCACCCTCAGCTCTAAGCGAGGTGCGCGGAAGGTCGTGCTGCGCATGCCCGCCCGCTTCCCTGAGATCTCGAAGTTC
CGCAGTTTCGCCCAGTGGGCCTATGGGCGCGGGCGTACACCGGGAGGCCACGTGATCCACCAGGAATGGGTGGAGCAGAC
TGACAAGGATGCTGAGTTGCTGCGCGTGCCCGCCGGCGAGTGGGTCCTTAAGGTTCTGCGCGTGCGCACCATCGACGGCT
CCCCCATCATGCTGGAGCGTACCCGCTACCCCGCCTGGGTAGGCACCAAGGTGGAGCCGATGGATCCCACCTGCCCGTCC
GTGACCAACGAGCTGGCCGCCCGCCACAACATTCACTTCTTCGCCGCCGACAACGTGTTCTCCGCGGCGAAAGCCGGGGA
GGTTGATGCGCGGTGGCTGCCCCTCGAGGCCGGCGATCCTGTTCTGGTACACCGGCGCCTCTCGCGCGATGCGAAGGGCA
CGCCGTTGGAGATGAGTGAGGATCGCTATATTGCGGACGCCCTCAGTATCGCCGTGCCCACGTCTGGCAAGAACAACGTT
CTCAGCTGGACTACGTTGAATCGCTTCCCCTGGGGCTAG

Upstream 100 bases:

>100_bases
CGCCCGCAACGCCGGACGCCTCGCCGGCAACCTGCGTAATACGCTGCTCCACAAGCTGCCACAAGAGTTTCGGCGCGGGT
ACCGCGAGGGGGACAAGTAA

Downstream 100 bases:

>100_bases
TTCCAGAGCTAGCTCCGGGGTTAGTTCCAGGTCTAGTTCCAGGTCTAGTTCCAGGGCATGCAGAAGGCCCCGGGCTCCTT
TACGGAACCCGGGGCCTTGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPTRYEQIARQLREDIRSGRFQVGEPIPSERALADRFDVAPGTMRQALNQLVDEGTLSSKRGARKVVLRMPARFPEISKF
RSFAQWAYGRGRTPGGHVIHQEWVEQTDKDAELLRVPAGEWVLKVLRVRTIDGSPIMLERTRYPAWVGTKVEPMDPTCPS
VTNELAARHNIHFFAADNVFSAAKAGEVDARWLPLEAGDPVLVHRRLSRDAKGTPLEMSEDRYIADALSIAVPTSGKNNV
LSWTTLNRFPWG

Sequences:

>Translated_252_residues
MPTRYEQIARQLREDIRSGRFQVGEPIPSERALADRFDVAPGTMRQALNQLVDEGTLSSKRGARKVVLRMPARFPEISKF
RSFAQWAYGRGRTPGGHVIHQEWVEQTDKDAELLRVPAGEWVLKVLRVRTIDGSPIMLERTRYPAWVGTKVEPMDPTCPS
VTNELAARHNIHFFAADNVFSAAKAGEVDARWLPLEAGDPVLVHRRLSRDAKGTPLEMSEDRYIADALSIAVPTSGKNNV
LSWTTLNRFPWG
>Mature_251_residues
PTRYEQIARQLREDIRSGRFQVGEPIPSERALADRFDVAPGTMRQALNQLVDEGTLSSKRGARKVVLRMPARFPEISKFR
SFAQWAYGRGRTPGGHVIHQEWVEQTDKDAELLRVPAGEWVLKVLRVRTIDGSPIMLERTRYPAWVGTKVEPMDPTCPSV
TNELAARHNIHFFAADNVFSAAKAGEVDARWLPLEAGDPVLVHRRLSRDAKGTPLEMSEDRYIADALSIAVPTSGKNNVL
SWTTLNRFPWG

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790540, Length=238, Percent_Identity=26.0504201680672, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788418, Length=223, Percent_Identity=23.7668161434978, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28383; Mature: 28251

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTRYEQIARQLREDIRSGRFQVGEPIPSERALADRFDVAPGTMRQALNQLVDEGTLSSK
CCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
RGARKVVLRMPARFPEISKFRSFAQWAYGRGRTPGGHVIHQEWVEQTDKDAELLRVPAGE
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHH
WVLKVLRVRTIDGSPIMLERTRYPAWVGTKVEPMDPTCPSVTNELAARHNIHFFAADNVF
HHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHH
SAAKAGEVDARWLPLEAGDPVLVHRRLSRDAKGTPLEMSEDRYIADALSIAVPTSGKNNV
HHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCE
LSWTTLNRFPWG
EEEEECCCCCCC
>Mature Secondary Structure 
PTRYEQIARQLREDIRSGRFQVGEPIPSERALADRFDVAPGTMRQALNQLVDEGTLSSK
CCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
RGARKVVLRMPARFPEISKFRSFAQWAYGRGRTPGGHVIHQEWVEQTDKDAELLRVPAGE
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHH
WVLKVLRVRTIDGSPIMLERTRYPAWVGTKVEPMDPTCPSVTNELAARHNIHFFAADNVF
HHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHH
SAAKAGEVDARWLPLEAGDPVLVHRRLSRDAKGTPLEMSEDRYIADALSIAVPTSGKNNV
HHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCE
LSWTTLNRFPWG
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]