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The map label for this gene is tnp3517a2 [H]

Identifier: 68536913

GI number: 68536913

Start: 2128280

End: 2129101

Strand: Direct

Name: tnp3517a2 [H]

Synonym: jk1823

Alternate gene names: 68536913

Gene position: 2128280-2129101 (Clockwise)

Preceding gene: 68536912

Following gene: 68536925

Centisome position: 86.43

GC content: 54.5

Gene sequence:

>822_bases
TTGGAGTACCTCCTAGAGGCAGCAGGTATCCCACGGTCGACGTTCTTCTATCACCAGAAACGACTCGGCCAGCCAGATAA
GCATGCCGAGCTCAAGGCCGAGATCCGGGCAAGTTTTGAACGTAACAAGCATCGCTACGGCTACCGGCGAGTGTTACTTG
ACCTGCGTAACCAGGGGTGGGTGGTCAACCACAAACTCGTGTACAAGCTCATGTGCGAGATGGGGCTGCGAGCCAAGATT
CGCCAACGTAGACCTTATGTTTCCTATGCTGGGACGATCAGTCACATCGCTGACAACAAGCTTGACCGCAAGTTCACCCC
GGATCAGCCAAATACCGTCTTTGTCAGCGACGTCACCGAGTTCAGGGTCGCAGGCCACAAGGTCTACCTGTCACCGGTGA
TGGACCTGTTTGACCGTTCAATTGTTGCCCACACCGTGGCTACATCGCCGTCGACAGCGTTTACCGCAGAGTCTTTAACC
AAGGCGATTAAAACGTGTGCGCCTGAACCCGGGTGGATGATGCACACTGACCAAGGATTCCAGTACCAGCACGCCTCCTG
GCGCGACCTGATCGGTGACAACGGCGGTGTTCAGTCGATGTCGCGTAAAGCCAACTGTTACGACAACGCGGTCATGCAGA
ACTTCTTCGGGCACATGAAGGCCGAGATGTACCACGGTGAAGTCTTCGACACCGTCGCAGAATTCAAGCAAGCAATCGAC
GAATACAACCAGTGGTACAACACCAAACGCATCCAACAACGACTCAAGGGTCTGACCCCGATGCAATATCGGAATCAGAC
CCTTGAAACCCTAACCGCCTAG

Upstream 100 bases:

>100_bases
TGGAAGCGGAAAACGCTTATTTAAAAAAATTGCGGGACTTGAGGAATCAGGGACGCGCCTGAAAGTCCAGGCGATTGTCA
TCCTCAAGTCGCACCACCGC

Downstream 100 bases:

>100_bases
AATTAAACCAGTCCAACTTTCGGGGGCCAGTTCAATGCGGCAGGGGGCCTAGCGTAGTGGCTGCCTAAGCGGCCAGAGCT
GCAGGGACTAGCGAGCCTTC

Product: transposase for IS3517

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MEYLLEAAGIPRSTFFYHQKRLGQPDKHAELKAEIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYAGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGHKVYLSPVMDLFDRSIVAHTVATSPSTAFTAESLT
KAIKTCAPEPGWMMHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMQNFFGHMKAEMYHGEVFDTVAEFKQAID
EYNQWYNTKRIQQRLKGLTPMQYRNQTLETLTA

Sequences:

>Translated_273_residues
MEYLLEAAGIPRSTFFYHQKRLGQPDKHAELKAEIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYAGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGHKVYLSPVMDLFDRSIVAHTVATSPSTAFTAESLT
KAIKTCAPEPGWMMHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMQNFFGHMKAEMYHGEVFDTVAEFKQAID
EYNQWYNTKRIQQRLKGLTPMQYRNQTLETLTA
>Mature_273_residues
MEYLLEAAGIPRSTFFYHQKRLGQPDKHAELKAEIRASFERNKHRYGYRRVLLDLRNQGWVVNHKLVYKLMCEMGLRAKI
RQRRPYVSYAGTISHIADNKLDRKFTPDQPNTVFVSDVTEFRVAGHKVYLSPVMDLFDRSIVAHTVATSPSTAFTAESLT
KAIKTCAPEPGWMMHTDQGFQYQHASWRDLIGDNGGVQSMSRKANCYDNAVMQNFFGHMKAEMYHGEVFDTVAEFKQAID
EYNQWYNTKRIQQRLKGLTPMQYRNQTLETLTA

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=220, Percent_Identity=27.7272727272727, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1789981, Length=267, Percent_Identity=44.5692883895131, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI1788405, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787263, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786753, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786570, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786490, Length=235, Percent_Identity=31.063829787234, Blast_Score=117, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31672; Mature: 31672

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLLEAAGIPRSTFFYHQKRLGQPDKHAELKAEIRASFERNKHRYGYRRVLLDLRNQGW
CCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVNHKLVYKLMCEMGLRAKIRQRRPYVSYAGTISHIADNKLDRKFTPDQPNTVFVSDVTE
EEHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHH
FRVAGHKVYLSPVMDLFDRSIVAHTVATSPSTAFTAESLTKAIKTCAPEPGWMMHTDQGF
HHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCC
QYQHASWRDLIGDNGGVQSMSRKANCYDNAVMQNFFGHMKAEMYHGEVFDTVAEFKQAID
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYNQWYNTKRIQQRLKGLTPMQYRNQTLETLTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEYLLEAAGIPRSTFFYHQKRLGQPDKHAELKAEIRASFERNKHRYGYRRVLLDLRNQGW
CCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VVNHKLVYKLMCEMGLRAKIRQRRPYVSYAGTISHIADNKLDRKFTPDQPNTVFVSDVTE
EEHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHH
FRVAGHKVYLSPVMDLFDRSIVAHTVATSPSTAFTAESLTKAIKTCAPEPGWMMHTDQGF
HHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCC
QYQHASWRDLIGDNGGVQSMSRKANCYDNAVMQNFFGHMKAEMYHGEVFDTVAEFKQAID
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYNQWYNTKRIQQRLKGLTPMQYRNQTLETLTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]