| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is entA [H]
Identifier: 68536909
GI number: 68536909
Start: 2122843
End: 2123604
Strand: Direct
Name: entA [H]
Synonym: jk1819
Alternate gene names: 68536909
Gene position: 2122843-2123604 (Clockwise)
Preceding gene: 68536908
Following gene: 68536910
Centisome position: 86.21
GC content: 61.02
Gene sequence:
>762_bases GTGATCGTGACAGGTGCTGCTGGAGGCATCGGCCGCGAGTGTGTGCGCCTGCTACGACAGAACGATCACACCGTGATCGG CTGGGATCTACCGGAAGTAGACATCACCTCTTCAAACCCGACTGACCCACGCAGCGTGGAAAGCCACCTGTCGAAAGCAC TGGCAGCTCACGGGCACATTGATGCACTCATCCACTGCGCGGGAACCTTAATCCCAGATAGCGCACTGACGGGCCCCACG GCAGTTGACACAGTTGACACAGTCTCGGGTATCGGTACGGACCCCGACGAGACCGGAGCCTGGGAAAACAACTTCGCTGT CAACGTCACCGGCTTAGCCCGCACATGCTCCGCAATCGCCCAGCACATGGTGGATCGCGGCACTGGAGCAATTGTGGCAG TGACTTCCAATGCAGCAGCACAGCCCCGGGCACGCATGGCCTCCTATGGAGCTTCCAAAGCGGCAGCGACTGCCTGGTTG AAAACTCTGGCGCTAGAGTGCGCCCCACACGGGGTGCGCTGCAACAGCGTATCCCCTGGTTCCACAGACACCGCGATGCT ACGCACCAGCTGGCACGGCGAGGATCGAGCCGCGCAGACCCTTGCCGGTGTACCGGAGGACTACCGGTTAGGCATCCCCT TACAACGCATCGCGCAGCCAGAAGATATCGCGGCAGCATGCCTCTTTCTTATCTCCCCTGCAGCCTGCCACATCACCATG CACGACCTCCGTGTTGATGGTGGCGCCACCCTAGATGCCTAG
Upstream 100 bases:
>100_bases GTCGATTACAGTGTCCGCTATGGATTTCAACATTCCTCCGCACCTAGCCACACGGCAGCCAACCGAGTCGCCGCCGGAGC AAGCGCAACTACAACAAACG
Downstream 100 bases:
>100_bases CCTCTGTACCCCACCAGCCCAACGAAAGGTTATCTCTATGGCGATTCCACCCATTTCGCCCTATCCCATCCCCACTCCAT CCACCACACTGCCCGCCGAT
Product: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MIVTGAAGGIGRECVRLLRQNDHTVIGWDLPEVDITSSNPTDPRSVESHLSKALAAHGHIDALIHCAGTLIPDSALTGPT AVDTVDTVSGIGTDPDETGAWENNFAVNVTGLARTCSAIAQHMVDRGTGAIVAVTSNAAAQPRARMASYGASKAAATAWL KTLALECAPHGVRCNSVSPGSTDTAMLRTSWHGEDRAAQTLAGVPEDYRLGIPLQRIAQPEDIAAACLFLISPAACHITM HDLRVDGGATLDA
Sequences:
>Translated_253_residues MIVTGAAGGIGRECVRLLRQNDHTVIGWDLPEVDITSSNPTDPRSVESHLSKALAAHGHIDALIHCAGTLIPDSALTGPT AVDTVDTVSGIGTDPDETGAWENNFAVNVTGLARTCSAIAQHMVDRGTGAIVAVTSNAAAQPRARMASYGASKAAATAWL KTLALECAPHGVRCNSVSPGSTDTAMLRTSWHGEDRAAQTLAGVPEDYRLGIPLQRIAQPEDIAAACLFLISPAACHITM HDLRVDGGATLDA >Mature_253_residues MIVTGAAGGIGRECVRLLRQNDHTVIGWDLPEVDITSSNPTDPRSVESHLSKALAAHGHIDALIHCAGTLIPDSALTGPT AVDTVDTVSGIGTDPDETGAWENNFAVNVTGLARTCSAIAQHMVDRGTGAIVAVTSNAAAQPRARMASYGASKAAATAWL KTLALECAPHGVRCNSVSPGSTDTAMLRTSWHGEDRAAQTLAGVPEDYRLGIPLQRIAQPEDIAAACLFLISPAACHITM HDLRVDGGATLDA
Specific function: Involved in an early step of the biosynthesis of the catechol siderophore vibriobactin. Vibriobactin is a chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=202, Percent_Identity=29.7029702970297, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI126723750, Length=149, Percent_Identity=30.8724832214765, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=29.9610894941634, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=27.6264591439689, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI15277342, Length=267, Percent_Identity=28.0898876404494, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=28.0172413793103, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI10190704, Length=271, Percent_Identity=28.7822878228782, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=38.1322957198444, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI1787335, Length=263, Percent_Identity=30.0380228136882, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082100, Length=272, Percent_Identity=28.3088235294118, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788459, Length=273, Percent_Identity=30.4029304029304, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789208, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1790717, Length=148, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=26.8, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115534694, Length=262, Percent_Identity=30.1526717557252, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71994604, Length=266, Percent_Identity=30.8270676691729, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17560332, Length=273, Percent_Identity=27.8388278388278, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562910, Length=275, Percent_Identity=28, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI72000259, Length=276, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17563726, Length=276, Percent_Identity=24.6376811594203, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562904, Length=273, Percent_Identity=26.3736263736264, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994600, Length=267, Percent_Identity=30.7116104868914, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=24.6323529411765, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560220, Length=280, Percent_Identity=25.3571428571429, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17561402, Length=148, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17562990, Length=273, Percent_Identity=24.1758241758242, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25147288, Length=267, Percent_Identity=26.9662921348315, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17560150, Length=272, Percent_Identity=24.2647058823529, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=24.3542435424354, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17559104, Length=276, Percent_Identity=25, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=215, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI23397609, Length=268, Percent_Identity=30.5970149253731, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24639444, Length=272, Percent_Identity=25, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI21357041, Length=265, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644337, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643142, Length=262, Percent_Identity=25.9541984732824, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI28571526, Length=265, Percent_Identity=28.3018867924528, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR003560 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.28 [H]
Molecular weight: Translated: 26231; Mature: 26231
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVTGAAGGIGRECVRLLRQNDHTVIGWDLPEVDITSSNPTDPRSVESHLSKALAAHGHI CEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCH DALIHCAGTLIPDSALTGPTAVDTVDTVSGIGTDPDETGAWENNFAVNVTGLARTCSAIA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH QHMVDRGTGAIVAVTSNAAAQPRARMASYGASKAAATAWLKTLALECAPHGVRCNSVSPG HHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC STDTAMLRTSWHGEDRAAQTLAGVPEDYRLGIPLQRIAQPEDIAAACLFLISPAACHITM CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEE HDLRVDGGATLDA EEEEECCCCCCCC >Mature Secondary Structure MIVTGAAGGIGRECVRLLRQNDHTVIGWDLPEVDITSSNPTDPRSVESHLSKALAAHGHI CEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCH DALIHCAGTLIPDSALTGPTAVDTVDTVSGIGTDPDETGAWENNFAVNVTGLARTCSAIA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH QHMVDRGTGAIVAVTSNAAAQPRARMASYGASKAAATAWLKTLALECAPHGVRCNSVSPG HHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC STDTAMLRTSWHGEDRAAQTLAGVPEDYRLGIPLQRIAQPEDIAAACLFLISPAACHITM CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEE HDLRVDGGATLDA EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371453; 10952301 [H]