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The map label for this gene is pecM [H]

Identifier: 68536831

GI number: 68536831

Start: 2032005

End: 2032814

Strand: Direct

Name: pecM [H]

Synonym: jk1741

Alternate gene names: 68536831

Gene position: 2032005-2032814 (Clockwise)

Preceding gene: 68536826

Following gene: 68536832

Centisome position: 82.52

GC content: 66.79

Gene sequence:

>810_bases
GTGACCACCCACCTCCTCCCAGCCGGGCATCCATTGTTTGCTGCGTTCATGAGGACGCTGCCGGCAGGGATCATCGCCTT
GTGCCTGTCGAGGCAGCTGCCGCGCGGTTCGTGGAGGTGGAAGAGCTTCGTGTTGGGCGGTCTGAACATGGCCGCGTTCT
TCCCCCTGCTGTTCTTGTCGGCGCAGCGTCTTCCGGGCGGGGTAGCGGCCACGCTGAATGCGGTACAGCCCATCATCGTT
GCCCTGCTGGCCGTGGCTGTCCTCCACGAGCAACTCTCCGGATGGCGTCTGGGATGGGGTGTCGTGGGTGTCGTGGGCGT
GGCCCTCGTGGTTCTCGGTCCAAGCGCTGCCCTGGACCCGGTGGGCGTGGTTGAAGGACTCGGCGGCGCAGTGGCCATGG
CCACCGGCGTGGTCCTCACCAAGAAGTGGAAGCTCCCGGAAGGTGTCTCGCCCGTCGCACTGGCCGGTTGGCAGCTGACG
TCCGCCGGCCTGCTGCTGGCGATCCCGGCGCTGCTGGTGGAGGGACCACCGCCGGTAATTCCTGTCCATGGCTGGCTTGG
GTACGCCTGGCTCGGCCTGGTCGGGGCGCTGGTCTCCTACAGCCTCTGGTTTACCGGCATCCGACGGCTTCCGGTCACGT
CCACAGCCCTCCTGGGACTCCTCTCGCCGTTGGTCGCCGCCCTGCTCGGCGCCCTGATCGCGCATGAACACCTCGGAGCC
GAGCAGTACCTCGGCTTCGCGATCGCCCTGGGTGCCATGGTCTGTGGCCAGCTCCCCGCCCCCACCAATTATCGAAAGGA
CAATTCATGA

Upstream 100 bases:

>100_bases
TGATGGATGCATGAACACTTCTTCTCATGGGCGCCGCGATTCGTTGCTGTGGACCTGTTTGACGGCGCTGGCCCCCGCTA
CGTGGGGGACGACATACATC

Downstream 100 bases:

>100_bases
ACATCACGATTCTCGGAGCCACCGGCATGGCCGGTACCGCGATCGCGCAGGAGGCCACACGCCGCGGCCACCACGTCACT
TCCGTATCGCGTAACCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTTHLLPAGHPLFAAFMRTLPAGIIALCLSRQLPRGSWRWKSFVLGGLNMAAFFPLLFLSAQRLPGGVAATLNAVQPIIV
ALLAVAVLHEQLSGWRLGWGVVGVVGVALVVLGPSAALDPVGVVEGLGGAVAMATGVVLTKKWKLPEGVSPVALAGWQLT
SAGLLLAIPALLVEGPPPVIPVHGWLGYAWLGLVGALVSYSLWFTGIRRLPVTSTALLGLLSPLVAALLGALIAHEHLGA
EQYLGFAIALGAMVCGQLPAPTNYRKDNS

Sequences:

>Translated_269_residues
MTTHLLPAGHPLFAAFMRTLPAGIIALCLSRQLPRGSWRWKSFVLGGLNMAAFFPLLFLSAQRLPGGVAATLNAVQPIIV
ALLAVAVLHEQLSGWRLGWGVVGVVGVALVVLGPSAALDPVGVVEGLGGAVAMATGVVLTKKWKLPEGVSPVALAGWQLT
SAGLLLAIPALLVEGPPPVIPVHGWLGYAWLGLVGALVSYSLWFTGIRRLPVTSTALLGLLSPLVAALLGALIAHEHLGA
EQYLGFAIALGAMVCGQLPAPTNYRKDNS
>Mature_268_residues
TTHLLPAGHPLFAAFMRTLPAGIIALCLSRQLPRGSWRWKSFVLGGLNMAAFFPLLFLSAQRLPGGVAATLNAVQPIIVA
LLAVAVLHEQLSGWRLGWGVVGVVGVALVVLGPSAALDPVGVVEGLGGAVAMATGVVLTKKWKLPEGVSPVALAGWQLTS
AGLLLAIPALLVEGPPPVIPVHGWLGYAWLGLVGALVSYSLWFTGIRRLPVTSTALLGLLSPLVAALLGALIAHEHLGAE
QYLGFAIALGAMVCGQLPAPTNYRKDNS

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 27865; Mature: 27733

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHLLPAGHPLFAAFMRTLPAGIIALCLSRQLPRGSWRWKSFVLGGLNMAAFFPLLFLS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
AQRLPGGVAATLNAVQPIIVALLAVAVLHEQLSGWRLGWGVVGVVGVALVVLGPSAALDP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCH
VGVVEGLGGAVAMATGVVLTKKWKLPEGVSPVALAGWQLTSAGLLLAIPALLVEGPPPVI
HHHHHHCCHHHHHHHHHHHEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCCEE
PVHGWLGYAWLGLVGALVSYSLWFTGIRRLPVTSTALLGLLSPLVAALLGALIAHEHLGA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQYLGFAIALGAMVCGQLPAPTNYRKDNS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTHLLPAGHPLFAAFMRTLPAGIIALCLSRQLPRGSWRWKSFVLGGLNMAAFFPLLFLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
AQRLPGGVAATLNAVQPIIVALLAVAVLHEQLSGWRLGWGVVGVVGVALVVLGPSAALDP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCH
VGVVEGLGGAVAMATGVVLTKKWKLPEGVSPVALAGWQLTSAGLLLAIPALLVEGPPPVI
HHHHHHCCHHHHHHHHHHHEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCCEE
PVHGWLGYAWLGLVGALVSYSLWFTGIRRLPVTSTALLGLLSPLVAALLGALIAHEHLGA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQYLGFAIALGAMVCGQLPAPTNYRKDNS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]