| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is whiB3
Identifier: 68536817
GI number: 68536817
Start: 2015024
End: 2015329
Strand: Direct
Name: whiB3
Synonym: jk1727
Alternate gene names: NA
Gene position: 2015024-2015329 (Clockwise)
Preceding gene: 68536814
Following gene: 68536826
Centisome position: 81.83
GC content: 66.67
Gene sequence:
>306_bases ATGCCACAGCCCAGCCAGCTTCCGGGACCCGCTTCTTCGACTTGGGAATGGCAGCTCCATGGCGCATGCCGCGGGGCGGA TTCTTCAGTCTTCTTCCACCCGGATGGCGAGCGTGGCCGTGCCCGTGCGATGCGCGAACACCGCGCCAAGGCCATCTGCC GCGAGTGCCCGGTGATCGAACAGTGCCGAAACCACGCGCTCAGCGTCGGCGAACCCTACGGCATCTGGGGCGGCCTGAGC GAGTCTGAGCGTGACGCTATCCTGCGCCCCACATCTCGCAACCGCAACCGCCGAGCAGCCTCCTAA
Upstream 100 bases:
>100_bases AGAAGGCACTCGCTCGTTACTTAGAGTTCATTTAAGGAATGGAACCTCACAGACGTCACTACAAGTGAGCATCTGACTTT TCACGAGGAGTAACCACCTA
Downstream 100 bases:
>100_bases AGGATTGCGTAGCCTCCTACCCCGAGGCAGCTCCCACAAAAGAAAGGGAGAGGGATAAATCCCTCTCCCTTTCCGTCTGC CTAGAGGCAGGCATACAGTG
Product: WhiB family transcriptional regulator
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; WhiB-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator; Transcription Factor WhiB Family; WhiB Family Transcriptional Factor; Whib Family Transcriptional Regulator; Transcriptional Regulator WhiB; WhiB-Type Transcription Regulator; Transcriptional Regulator WhiD; WhiB Protein; Whib-Like Transcriptional Regulator; WhiB Transcriptional Regulator
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MPQPSQLPGPASSTWEWQLHGACRGADSSVFFHPDGERGRARAMREHRAKAICRECPVIEQCRNHALSVGEPYGIWGGLS ESERDAILRPTSRNRNRRAAS
Sequences:
>Translated_101_residues MPQPSQLPGPASSTWEWQLHGACRGADSSVFFHPDGERGRARAMREHRAKAICRECPVIEQCRNHALSVGEPYGIWGGLS ESERDAILRPTSRNRNRRAAS >Mature_100_residues PQPSQLPGPASSTWEWQLHGACRGADSSVFFHPDGERGRARAMREHRAKAICRECPVIEQCRNHALSVGEPYGIWGGLSE SERDAILRPTSRNRNRRAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11267; Mature: 11136
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPSQLPGPASSTWEWQLHGACRGADSSVFFHPDGERGRARAMREHRAKAICRECPVIE CCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHH QCRNHALSVGEPYGIWGGLSESERDAILRPTSRNRNRRAAS HHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure PQPSQLPGPASSTWEWQLHGACRGADSSVFFHPDGERGRARAMREHRAKAICRECPVIE CCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHH QCRNHALSVGEPYGIWGGLSESERDAILRPTSRNRNRRAAS HHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA