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The map label for this gene is tnp1513f2 [H]

Identifier: 68536670

GI number: 68536670

Start: 1856486

End: 1857070

Strand: Direct

Name: tnp1513f2 [H]

Synonym: jk1585

Alternate gene names: 68536670

Gene position: 1856486-1857070 (Clockwise)

Preceding gene: 68536667

Following gene: 68536672

Centisome position: 75.39

GC content: 53.5

Gene sequence:

>585_bases
GTGCATCGACATGTTTTCCGACAAGATGCGGTCCTCGACAAGACGGACCACACGGTCCTTCGCATCCTGGTCAAATTTTC
TTGGCATGTTCCAGATTTTCCCATCTACTCAAACGGAACAAAACCTGGGACACTTCATAAAGGTGGCAAAAGCGCGCTGA
TTACCCTAGTAGAGCGCACCAGCCGTTACACCCTGCTTGGACACCTTCCCGATGAGCACAGTTCACACACCGTGGTCGCA
ACCCTGCAGGACATGGTCAAAGACCTCAACACCGAGCAGCTAAAGACCATCACATGGGACCAAGGCGCAGAAATGGCTGT
CACAGCACAAGTCCAGATTAAAGACGGCTGCCAGGTGTTTTTCTGTGAACCGCACTCACCGTGGCAGAGACCAACCAACG
AGAACACCAACGGCGAGATCAGGCGCAGGTTCTACAAAAAGGGCACCGACTTTGCCACCGTCACACCCGAACATGTCGCG
TGGGTGCAAAATGAGCTCAACGAAACACCCCGACAAATCCTCGGCGGCGCAACCCCACGTGAAATACTTAACGAACTATT
CAAGCGTGGCGCATCCACCGCTTGA

Upstream 100 bases:

>100_bases
GGGTTCTGGGATGTTTCCCGCACGGCGGGCCTGCTTAAGTCCATTGACGAGCCGTGTGCCATGACACCCCCAGCTTTGGA
GCTACTGCCTGGCACGCGGC

Downstream 100 bases:

>100_bases
TTCCGCCGTAGATGAATTCCTTGAGATTGTGTTGGCTTTTTCGCAGTGGCGGTCGAACACCGCACGCGGAAATAGTCGAT
TGTATCGATACCTAGCGGAA

Product: transposase for IS1513f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MHRHVFRQDAVLDKTDHTVLRILVKFSWHVPDFPIYSNGTKPGTLHKGGKSALITLVERTSRYTLLGHLPDEHSSHTVVA
TLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVA
WVQNELNETPRQILGGATPREILNELFKRGASTA

Sequences:

>Translated_194_residues
MHRHVFRQDAVLDKTDHTVLRILVKFSWHVPDFPIYSNGTKPGTLHKGGKSALITLVERTSRYTLLGHLPDEHSSHTVVA
TLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVA
WVQNELNETPRQILGGATPREILNELFKRGASTA
>Mature_194_residues
MHRHVFRQDAVLDKTDHTVLRILVKFSWHVPDFPIYSNGTKPGTLHKGGKSALITLVERTSRYTLLGHLPDEHSSHTVVA
TLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVA
WVQNELNETPRQILGGATPREILNELFKRGASTA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=142, Percent_Identity=43.6619718309859, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI1790736, Length=142, Percent_Identity=43.6619718309859, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI1787671, Length=142, Percent_Identity=43.6619718309859, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22040; Mature: 22040

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRHVFRQDAVLDKTDHTVLRILVKFSWHVPDFPIYSNGTKPGTLHKGGKSALITLVERT
CCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHC
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVF
CCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEE
FCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPR
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHCCCCHH
EILNELFKRGASTA
HHHHHHHHCCCCCC
>Mature Secondary Structure
MHRHVFRQDAVLDKTDHTVLRILVKFSWHVPDFPIYSNGTKPGTLHKGGKSALITLVERT
CCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHC
SRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVF
CCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEECCCCEEE
FCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPR
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHCCCCHH
EILNELFKRGASTA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]