| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is insI1 [H]
Identifier: 68536667
GI number: 68536667
Start: 1854635
End: 1855459
Strand: Direct
Name: insI1 [H]
Synonym: jk1581
Alternate gene names: 68536667
Gene position: 1854635-1855459 (Clockwise)
Preceding gene: 68536664
Following gene: 68536670
Centisome position: 75.32
GC content: 54.42
Gene sequence:
>825_bases ATGCCAGCACCGATGAAAACTCAAGCCGTTGATGGATTTCCTAGCGGCGTATTCGACAAACACGCCTTAGTAGGGCGTGG TCGCAGGCTTACTGTTGAAGACCGTGTTGCTATTGAAGCGGGATGTCGTGTCGGTGATTCGGCACGAGCCATCGCGCAGA AAATAAATAGGCACCACAGTGTCGTCGCTCGTGAAATCACCCGTAATGGTTGGAAGATCGTCGATGAGGACGGCACAGAG CAGCTGCGGTATAACGCCCACAACGCTGCTGTTTCTACTGCTGGTCGGATGGTGCGGCCAAAACTACGCAAGCTCGATGA AAGCCCAACGCGTCGGGGTGTAGTAGTCGATTGCCTTGCCCGCAGGTGGTCACCTGGGCGCATTAGTGCATGGCTTGAGC ATGCTTTCAGCGATGATGAAAGCATGCGTATTTCCCACGAAGCGATCTACAGTGCCTTATACATTCAAGGCAAAGGCAGC CTGCGAGCCGAGCTTGAAGAAGTCATGAAGACTAAAGACGTACTTATCCGCGGCGGCTCAACACGCAAGCGTCGTGCCCG AAACGCTGGCGTGTTAACCGGTCGCCCTTGGATCAAAGGTGCTGAGATCACCCACCGCAGCCCGGAAGCTGATGACAGGG CTATTCCCGGGCACTGGGAGGGCGACCTTGTTATTGGTAATGAAGTGCCCCGGGTTTTGTTCCTAGGCATTTGCCTTGAT TTCTATTATTGCTTGCGGCGGGTGCTGCTCCCAAAATTCGGTTTCCACTTCGACTGGGGTTCGGTATCCCAAGCTTTGGT GAAGCCTCGTCTCGTTCCACCATGA
Upstream 100 bases:
>100_bases GCGGTATGCGAAGTTACGCCGGCAGCGACATCGTCGAACGCCTGATGAGGCGGTGGTGTCTTTGCCAGATACAGGCAAGA AGCTGGGTAAAGATTCTGTT
Downstream 100 bases:
>100_bases CACCCACTCGAACGTCGCGATTTCTACCTCGACAACGTCATTCCACCTGCGAGTATGGATCAGCTCGTTTTTGTAGGAGC CGTTAACGTTTTCAGCCAGA
Product: transposase for IS1513f
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTE QLRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGS LRAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGNEVPRVLFLGICLD FYYCLRRVLLPKFGFHFDWGSVSQALVKPRLVPP
Sequences:
>Translated_274_residues MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTE QLRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGS LRAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGNEVPRVLFLGICLD FYYCLRRVLLPKFGFHFDWGSVSQALVKPRLVPP >Mature_273_residues PAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTEQ LRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSL RAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGNEVPRVLFLGICLDF YYCLRRVLLPKFGFHFDWGSVSQALVKPRLVPP
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=208, Percent_Identity=33.6538461538462, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790736, Length=208, Percent_Identity=32.6923076923077, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787671, Length=208, Percent_Identity=32.6923076923077, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 30692; Mature: 30560
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHS CCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH VVAREITRNGWKIVDEDGTEQLRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLA HHHHHHHCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSLRAELEEVMKTKDVLIRGGS HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHEEECCC TRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGNEVPRVLFLGICLD HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH FYYCLRRVLLPKFGFHFDWGSVSQALVKPRLVPP HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure PAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHS CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH VVAREITRNGWKIVDEDGTEQLRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLA HHHHHHHCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSLRAELEEVMKTKDVLIRGGS HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHEEECCC TRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGNEVPRVLFLGICLD HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH FYYCLRRVLLPKFGFHFDWGSVSQALVKPRLVPP HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]