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The map label for this gene is perM [C]

Identifier: 68536533

GI number: 68536533

Start: 1704687

End: 1706513

Strand: Direct

Name: perM [C]

Synonym: jk1447

Alternate gene names: 68536533

Gene position: 1704687-1706513 (Clockwise)

Preceding gene: 68536532

Following gene: 68536534

Centisome position: 69.23

GC content: 59.88

Gene sequence:

>1827_bases
ATGGGGAGAATGAACTCCCAGAACCCCCACGACAGGTCCTTTCCTCGTAAGGATGGCCGTGATTTTGCAGACTTTATCGC
GGGTTCCCATCGCATGGATACGGAAAACATCCCAATCCCGGGTGACGATAGAGACGAAGAACGCCTCGGCAACAGCCGGT
TCGCTGACGAACCGCAGGCAGCCAAGCACCCAACCGTAAGTCCTGATTCCCCCGAGGCCGAGCTGGTCGAGGACAGGCGG
GCGGAAACCTCCCCCACCGTGGAGGAAAAGGGGGATTCCTACGTCCAGGAGCGCAACACAGCCCGCGCCACAACGGGCAC
GGAGAAGCCACTGGATGAAGATCACGAGCCGGATGGGGAGACAGAGACCGACGATCACCCCGGCCTTCGTTCTCATTCCG
CAAAGGTTAAAAAGAAGGCCAAGAAACCAGCCAAGAAGTCTCCCCTAGATGAGGAGCTGAACCCTGAACTACGCGACCGT
GCGGAGGTCATCGGCACCACGGGTCGCTGGTTTGCAGGCTGGTGCTTGCGCTTCATCATCATCGCTGCGGCTCTCTACCT
AGGTTTCCAGGTATTCGGCAAGCTTTGGGCAGGCATTCTGCCGGTCTGTCTGTCGGTCATCGTATGTACCGTGCTGTGGC
CAGTCGTGCGTCTGCTCCGCAAGGCTAAGATCCCCAACAGCTTGGCTGTGCTGATCTCTATCCTGGGCTTCTTCGCCCTC
ATCATCGGCACCTTCGCCGCCATCGCGCCCAGTGCCGTGGACCAGGGTAAGACGATCGTTAACCAGGCCAGCGATGGCAT
CGGCCGGATCCAGGACTGGCTGCAAGGTCCTCCCGTTAACTTGCAGGAAAGCCAGTTCAACGACGGTGTTCAGCAGATCA
CCGACTGGCTGCAGAACAAGTCCGGCGACATCGCAACCAGCATTGCCGCTTTCGGCACGGAGACTGCTTCCCTGCTGGTC
ACTCTCTTCGTGATGTTGGTTCTGACGTTCTTCTTCTTGAAGGACGGAGAGAACTTCCTGCCGATGCTGCGCCGCGTGAC
CGGCCGCCGTGTCGGCTGGCACCTCACTGAGGTTCTGACCCGCTGCTGGAACACACTGGGTGGCTTCATCCGCACCCAGG
CCATCGTGTCCGCGATCGACGCCATCTTTATCGGTCTGGGTCTGGTGCTGCTGAACGTGCCACTGGCCGGCCCGCTAGCT
ATCCTGACTTTCTTCGGTGGATTCATCCCGATGGTCGGCGCATTCGTCGCCGGTGCTCTGTCTGTGTTGATCGCTCTGGT
GGCAGTCGACTTCAACACCGCCGTTATGGCGCTGCTCCTGGTTGTTGCCGTCCAACAGCTGGAGGGCAACATCCTGCAGC
CGGTGCTGCAGTCCCGCGCGATGAACGTCCACCCCGTCATCATCCTGCTTTCCGTCACCCTGGGCTCCACCCTGTTCGGC
ATCATCGGTGCATTCCTGGCTGTGCCCTGTGCCGCCATGATCGCCGTAATTCTGCGTTACATGGGCGACCTAACGGACCT
TGCTACGGGCGAGAAAACCTCCCGGGATATCGAGTTTGCTACCACTGCCGGTTCCCTAACGGGCGAACAATCAGAGCGAG
CCGCCCAACGCTGGCAGGAGCTGCGTAAGGCCATGATGCTGAACAGCTCCGATAAGACTGATTCCGCCGAGTCCTCCAAA
GCCACGACCACCGCGGCGGTCAGCGACGCTCCTACGGAGACGGCAGCAGACGCAGACGAGGGGGCGTCATCCCTCAGCGA
CAAGAGAGCACAGATCCGCGGTAAGGTGCAGTCAATTTATAAGTCCCTCCGTGGCAATAACGAGTAG

Upstream 100 bases:

>100_bases
CCTACTCCAGGTGAACACATCCTCCGCGGCGCATTAGGCCGCCAAATAACACGCCCCGGGGTGCGTCATAAACTCCCGTT
TTGGACCTGCGTGAGGCAGA

Downstream 100 bases:

>100_bases
AGCAAGCCGAAGAAGTAGCATTACCCCGTGACCGAAAGCAGCCGACACAGAAGCAATAGCCGCACCGCACACCGAGGCGT
ACGCAGCCGCGGCCTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MGRMNSQNPHDRSFPRKDGRDFADFIAGSHRMDTENIPIPGDDRDEERLGNSRFADEPQAAKHPTVSPDSPEAELVEDRR
AETSPTVEEKGDSYVQERNTARATTGTEKPLDEDHEPDGETETDDHPGLRSHSAKVKKKAKKPAKKSPLDEELNPELRDR
AEVIGTTGRWFAGWCLRFIIIAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVVRLLRKAKIPNSLAVLISILGFFAL
IIGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQITDWLQNKSGDIATSIAAFGTETASLLV
TLFVMLVLTFFFLKDGENFLPMLRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLA
ILTFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMNVHPVIILLSVTLGSTLFG
IIGAFLAVPCAAMIAVILRYMGDLTDLATGEKTSRDIEFATTAGSLTGEQSERAAQRWQELRKAMMLNSSDKTDSAESSK
ATTTAAVSDAPTETAADADEGASSLSDKRAQIRGKVQSIYKSLRGNNE

Sequences:

>Translated_608_residues
MGRMNSQNPHDRSFPRKDGRDFADFIAGSHRMDTENIPIPGDDRDEERLGNSRFADEPQAAKHPTVSPDSPEAELVEDRR
AETSPTVEEKGDSYVQERNTARATTGTEKPLDEDHEPDGETETDDHPGLRSHSAKVKKKAKKPAKKSPLDEELNPELRDR
AEVIGTTGRWFAGWCLRFIIIAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVVRLLRKAKIPNSLAVLISILGFFAL
IIGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQITDWLQNKSGDIATSIAAFGTETASLLV
TLFVMLVLTFFFLKDGENFLPMLRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLA
ILTFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMNVHPVIILLSVTLGSTLFG
IIGAFLAVPCAAMIAVILRYMGDLTDLATGEKTSRDIEFATTAGSLTGEQSERAAQRWQELRKAMMLNSSDKTDSAESSK
ATTTAAVSDAPTETAADADEGASSLSDKRAQIRGKVQSIYKSLRGNNE
>Mature_607_residues
GRMNSQNPHDRSFPRKDGRDFADFIAGSHRMDTENIPIPGDDRDEERLGNSRFADEPQAAKHPTVSPDSPEAELVEDRRA
ETSPTVEEKGDSYVQERNTARATTGTEKPLDEDHEPDGETETDDHPGLRSHSAKVKKKAKKPAKKSPLDEELNPELRDRA
EVIGTTGRWFAGWCLRFIIIAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVVRLLRKAKIPNSLAVLISILGFFALI
IGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQITDWLQNKSGDIATSIAAFGTETASLLVT
LFVMLVLTFFFLKDGENFLPMLRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLAI
LTFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMNVHPVIILLSVTLGSTLFGI
IGAFLAVPCAAMIAVILRYMGDLTDLATGEKTSRDIEFATTAGSLTGEQSERAAQRWQELRKAMMLNSSDKTDSAESSKA
TTTAAVSDAPTETAADADEGASSLSDKRAQIRGKVQSIYKSLRGNNE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=314, Percent_Identity=27.0700636942675, Blast_Score=86, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 65868; Mature: 65737

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMNSQNPHDRSFPRKDGRDFADFIAGSHRMDTENIPIPGDDRDEERLGNSRFADEPQA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
AKHPTVSPDSPEAELVEDRRAETSPTVEEKGDSYVQERNTARATTGTEKPLDEDHEPDGE
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCC
TETDDHPGLRSHSAKVKKKAKKPAKKSPLDEELNPELRDRAEVIGTTGRWFAGWCLRFII
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVVRLLRKAKIPNSLAVLISILGFFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IIGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQITDWLQNK
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
SGDIATSIAAFGTETASLLVTLFVMLVLTFFFLKDGENFLPMLRRVTGRRVGWHLTEVLT
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
RCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLAILTFFGGFIPMVGAFVAGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMNVHPVIILLSVTLGSTLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IIGAFLAVPCAAMIAVILRYMGDLTDLATGEKTSRDIEFATTAGSLTGEQSERAAQRWQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
LRKAMMLNSSDKTDSAESSKATTTAAVSDAPTETAADADEGASSLSDKRAQIRGKVQSIY
HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KSLRGNNE
HHHCCCCC
>Mature Secondary Structure 
GRMNSQNPHDRSFPRKDGRDFADFIAGSHRMDTENIPIPGDDRDEERLGNSRFADEPQA
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC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HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]