Click here to switch to the map view.

The map label for this gene is 68536509

Identifier: 68536509

GI number: 68536509

Start: 1682583

End: 1683149

Strand: Direct

Name: 68536509

Synonym: jk1423

Alternate gene names: NA

Gene position: 1682583-1683149 (Clockwise)

Preceding gene: 68536508

Following gene: 68536510

Centisome position: 68.33

GC content: 63.32

Gene sequence:

>567_bases
ATGCCGAAGATCACAGAGACGACAGTAGCGGAGCACCGCGCGGTCCAGCACCGCGCAGTGCTGGAGGCCGCCGAGCGGCT
GATCGTTGCTGGCGGCGGCAAGGTTCCCTCCCTGGCAGAGGTGGCGGCCGAGGTTGGCCTGGCCCGCCCCAGCGTCTACC
GCTACGTCTCCTCCCAACATGATCTGATGGTTCAGCTGCTGGTACTTAACAGCGAAACCTGGCACGACCAGCTGGAAGAC
AAAGTCAAGGCCGCTCCGCCAGAGCCCGAAGATCGCATCTGCGCTTACGTGGACGCGATGCTCGACCTCTTCGTTCACGG
CTCCCACGGCCCGCTGATGGCCGCCGCCCAGCACTTCCCGGAGGCGTTCGCCGAGGAAAGGGTGCAGAAATCGCACGCCG
GCTTCAAGGAAATCGTGGATAGCTTCTGCCCCGGTGTTTCCTCCATCGACATCGGATTGCTGAATGCGGCGGTGGTGAGG
GCGTCAGAAATAGCAAAAACCCCCGAAGACCTCGAACAAGCGACGGCGACGCTGCACCACATGGCGCGCGCCATCGTGTC
GAGCTAA

Upstream 100 bases:

>100_bases
GGTCTACGAAATGGTCGATGGGCGCCTGAGCGCTGCATCCAAATAGGCACCCAAATAGGCCTATACGCAGGCCGAAAAGC
GGGTAGTAAACTAGGGAACC

Downstream 100 bases:

>100_bases
TTCGTCGAACTACCTGCCTGATTCTGCTGTTATGCCTGGGCAAGACCGGGCGGCGTTGTAGGCTTTAGGTCATGCGAAAT
CGCCTTGTTGCACTCTCCAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; WhiR Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPKITETTVAEHRAVQHRAVLEAAERLIVAGGGKVPSLAEVAAEVGLARPSVYRYVSSQHDLMVQLLVLNSETWHDQLED
KVKAAPPEPEDRICAYVDAMLDLFVHGSHGPLMAAAQHFPEAFAEERVQKSHAGFKEIVDSFCPGVSSIDIGLLNAAVVR
ASEIAKTPEDLEQATATLHHMARAIVSS

Sequences:

>Translated_188_residues
MPKITETTVAEHRAVQHRAVLEAAERLIVAGGGKVPSLAEVAAEVGLARPSVYRYVSSQHDLMVQLLVLNSETWHDQLED
KVKAAPPEPEDRICAYVDAMLDLFVHGSHGPLMAAAQHFPEAFAEERVQKSHAGFKEIVDSFCPGVSSIDIGLLNAAVVR
ASEIAKTPEDLEQATATLHHMARAIVSS
>Mature_187_residues
PKITETTVAEHRAVQHRAVLEAAERLIVAGGGKVPSLAEVAAEVGLARPSVYRYVSSQHDLMVQLLVLNSETWHDQLEDK
VKAAPPEPEDRICAYVDAMLDLFVHGSHGPLMAAAQHFPEAFAEERVQKSHAGFKEIVDSFCPGVSSIDIGLLNAAVVRA
SEIAKTPEDLEQATATLHHMARAIVSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20335; Mature: 20204

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITETTVAEHRAVQHRAVLEAAERLIVAGGGKVPSLAEVAAEVGLARPSVYRYVSSQH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCH
DLMVQLLVLNSETWHDQLEDKVKAAPPEPEDRICAYVDAMLDLFVHGSHGPLMAAAQHFP
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EAFAEERVQKSHAGFKEIVDSFCPGVSSIDIGLLNAAVVRASEIAKTPEDLEQATATLHH
HHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MARAIVSS
HHHHHHCC
>Mature Secondary Structure 
PKITETTVAEHRAVQHRAVLEAAERLIVAGGGKVPSLAEVAAEVGLARPSVYRYVSSQH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCH
DLMVQLLVLNSETWHDQLEDKVKAAPPEPEDRICAYVDAMLDLFVHGSHGPLMAAAQHFP
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EAFAEERVQKSHAGFKEIVDSFCPGVSSIDIGLLNAAVVRASEIAKTPEDLEQATATLHH
HHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MARAIVSS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA