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The map label for this gene is kipR [H]

Identifier: 68536299

GI number: 68536299

Start: 1437524

End: 1438258

Strand: Direct

Name: kipR [H]

Synonym: jk1222

Alternate gene names: 68536299

Gene position: 1437524-1438258 (Clockwise)

Preceding gene: 68536296

Following gene: 68536301

Centisome position: 58.38

GC content: 62.99

Gene sequence:

>735_bases
ATGGGACACAATACGGAAATTCCCGCAACTAGCGGCATTCAAGTTTTGGACCGAGCGATCTTCATCCTATCGGTCATCGC
AGCAGAACCTCGCAACCTTTCCGACCTGTGCGCCATCACGGGCCTGCCGCGCGCCACTGCGCACCGTATCGCCGTCGCAC
TGGAAAAGCACCGGTTGATCGAGCGCGGGGCCGACGGTGCGTGGGTCACTGGCCCAGCCCTGTCCGAGATGGCACCGTCT
ACCTCTTCTCGTTTGGAGGACGCCGCAGAGTTCATCCTCCCCGACCTCATGGCAAAGACTGGCGAGTCCGTGCAGCTATA
TCGCCTTTCCGGAATGGAACGCGTGTGCATCGCCAACGCCGAACCCGCCACCGGTCTGCGCGATACCGTGCCGATTGGTC
ACCGCATGACATTGAACGCGGGCTCCGCAGCCAAGCTGTTGGTTGCCTATGCGCCGGAGGCATTCCAGAACCAGGTTTTG
CCGGACGCCGCGTACACGCGCGAGGACTTGGAGAAGATTGCCGACGAAGGGATCGCAGAATCCTCCGCCGAGCGCGACCC
CTCCCTGGCTTCGGCCTCCGTGCCGATCTTCGGGTCGGATATGCCGAACCGCACAGTCATCGCCTGCCTTTCCATCTCTG
GCCCCGTGGCGCGCATGGGCGACCACCCGGCGGAGAAGTTCGGCGCGGACTTAAAGGAATCCGCCCGCCAGCTGGAGAAC
CTGCTGCGGAAGTAG

Upstream 100 bases:

>100_bases
GCGCCAGACTTTTTCCGCGAGGGTTAAGGGTTGGTTCGTCACGGTCTCTCCTCTGTGTCCGCTATACAGTTCCACTGGAT
GGAATGTATAGTATCAAATC

Downstream 100 bases:

>100_bases
CTACTCCCCGAGACCGTTTGGGGTTCCGTGTGGACCCGCGACGGCCTGGCCCGCCGCGACCGCAGCCTGCTGCCCTGTCG
GCTATGAAGGTCGCCCAGGA

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGHNTEIPATSGIQVLDRAIFILSVIAAEPRNLSDLCAITGLPRATAHRIAVALEKHRLIERGADGAWVTGPALSEMAPS
TSSRLEDAAEFILPDLMAKTGESVQLYRLSGMERVCIANAEPATGLRDTVPIGHRMTLNAGSAAKLLVAYAPEAFQNQVL
PDAAYTREDLEKIADEGIAESSAERDPSLASASVPIFGSDMPNRTVIACLSISGPVARMGDHPAEKFGADLKESARQLEN
LLRK

Sequences:

>Translated_244_residues
MGHNTEIPATSGIQVLDRAIFILSVIAAEPRNLSDLCAITGLPRATAHRIAVALEKHRLIERGADGAWVTGPALSEMAPS
TSSRLEDAAEFILPDLMAKTGESVQLYRLSGMERVCIANAEPATGLRDTVPIGHRMTLNAGSAAKLLVAYAPEAFQNQVL
PDAAYTREDLEKIADEGIAESSAERDPSLASASVPIFGSDMPNRTVIACLSISGPVARMGDHPAEKFGADLKESARQLEN
LLRK
>Mature_243_residues
GHNTEIPATSGIQVLDRAIFILSVIAAEPRNLSDLCAITGLPRATAHRIAVALEKHRLIERGADGAWVTGPALSEMAPST
SSRLEDAAEFILPDLMAKTGESVQLYRLSGMERVCIANAEPATGLRDTVPIGHRMTLNAGSAAKLLVAYAPEAFQNQVLP
DAAYTREDLEKIADEGIAESSAERDPSLASASVPIFGSDMPNRTVIACLSISGPVARMGDHPAEKFGADLKESARQLENL
LRK

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI87082359, Length=252, Percent_Identity=27.3809523809524, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786468, Length=241, Percent_Identity=26.5560165975104, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 25981; Mature: 25850

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHNTEIPATSGIQVLDRAIFILSVIAAEPRNLSDLCAITGLPRATAHRIAVALEKHRLI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERGADGAWVTGPALSEMAPSTSSRLEDAAEFILPDLMAKTGESVQLYRLSGMERVCIANA
HCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECC
EPATGLRDTVPIGHRMTLNAGSAAKLLVAYAPEAFQNQVLPDAAYTREDLEKIADEGIAE
CCCCCCCCCCCCCCEEEECCCCHHHHHHEECCHHHHHCCCCCHHHHHHHHHHHHHCCHHH
SSAERDPSLASASVPIFGSDMPNRTVIACLSISGPVARMGDHPAEKFGADLKESARQLEN
CCCCCCCCCHHCCCCEECCCCCCCEEEEEEECCCCHHHHCCCCHHHHCCHHHHHHHHHHH
LLRK
HHCC
>Mature Secondary Structure 
GHNTEIPATSGIQVLDRAIFILSVIAAEPRNLSDLCAITGLPRATAHRIAVALEKHRLI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERGADGAWVTGPALSEMAPSTSSRLEDAAEFILPDLMAKTGESVQLYRLSGMERVCIANA
HCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECC
EPATGLRDTVPIGHRMTLNAGSAAKLLVAYAPEAFQNQVLPDAAYTREDLEKIADEGIAE
CCCCCCCCCCCCCCEEEECCCCHHHHHHEECCHHHHHCCCCCHHHHHHHHHHHHHCCHHH
SSAERDPSLASASVPIFGSDMPNRTVIACLSISGPVARMGDHPAEKFGADLKESARQLEN
CCCCCCCCCHHCCCCEECCCCCCCEEEEEEECCCCHHHHCCCCHHHHCCHHHHHHHHHHH
LLRK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]