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The map label for this gene is tnp3516a1

Identifier: 68536210

GI number: 68536210

Start: 1333342

End: 1333824

Strand: Direct

Name: tnp3516a1

Synonym: jk1133

Alternate gene names: NA

Gene position: 1333342-1333824 (Clockwise)

Preceding gene: 68536197

Following gene: 68536211

Centisome position: 54.15

GC content: 54.87

Gene sequence:

>483_bases
TTGAGAGCACGAAGTTCGCTGAATGAGCAGCAGCGTGAACAGCTGGTGGAGTGTTTCGAGCAAGGCATGGGCGAAACAGC
CGCTGCCAATGCTCTTGGTGTCCCCAAAAACGCCGTCCGTTTGCTCTATCGTCGGTTTCAGCTGCATGGCAGGCTATGTC
TTGTGGAGAAACCGACAAAGCAGCAGTATTCGTTCGAGTTCAAAAAGGAAGTTGTCGAGCGCCACCTTTCCGGCGAGACA
AAGATGAATCTTGCACGTGAATTTAACCTGTCGTCGGACCAGCTGGTCAGTTATTGGTCGCGGCAATGGCGTAAAGGTGG
CGACGAGGCGTTAAAACCGAAGCCGAAGGGCAGGCCCAAAGGTTCGGCTGTGCCAAAGCCGCTGACCGAAGAGGAGAAGC
TGCGGCGCCGGATCGCGCGGTTGGAAGCGGAAAACGCTTATCTAAAAAAATTGCGGGACTTGAGGAACCAGAGACGCGCC
TGA

Upstream 100 bases:

>100_bases
TAGCACGAAATAGCACAAACGCCCGCCACCTCGTACTTTGAACTGCTCCCCATTAGTTGGACTGAGAAATCAGTTACCGA
CTAGTGGGGAGCAGTTTTCA

Downstream 100 bases:

>100_bases
AAGTCCAGGCGATTGTCATCCTCAAGTCGCACCACCGCCTGGAGTATCTCCTAAAGGCAGCAGGTATCCCACGGTCGACG
TTCTTCTACCACCAGAAACG

Product: transposase for IS3516a

Products: NA

Alternate protein names: Transposase For IS; Transposase For Insertion Sequence; Transposase ; ISPsy8 Transposase OrfA; Transposase And Inactivated Derivative; Insertion Element

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRARSSLNEQQREQLVECFEQGMGETAAANALGVPKNAVRLLYRRFQLHGRLCLVEKPTKQQYSFEFKKEVVERHLSGET
KMNLAREFNLSSDQLVSYWSRQWRKGGDEALKPKPKGRPKGSAVPKPLTEEEKLRRRIARLEAENAYLKKLRDLRNQRRA

Sequences:

>Translated_160_residues
MRARSSLNEQQREQLVECFEQGMGETAAANALGVPKNAVRLLYRRFQLHGRLCLVEKPTKQQYSFEFKKEVVERHLSGET
KMNLAREFNLSSDQLVSYWSRQWRKGGDEALKPKPKGRPKGSAVPKPLTEEEKLRRRIARLEAENAYLKKLRDLRNQRRA
>Mature_160_residues
MRARSSLNEQQREQLVECFEQGMGETAAANALGVPKNAVRLLYRRFQLHGRLCLVEKPTKQQYSFEFKKEVVERHLSGET
KMNLAREFNLSSDQLVSYWSRQWRKGGDEALKPKPKGRPKGSAVPKPLTEEEKLRRRIARLEAENAYLKKLRDLRNQRRA

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18682; Mature: 18682

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARSSLNEQQREQLVECFEQGMGETAAANALGVPKNAVRLLYRRFQLHGRLCLVEKPTK
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
QQYSFEFKKEVVERHLSGETKMNLAREFNLSSDQLVSYWSRQWRKGGDEALKPKPKGRPK
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GSAVPKPLTEEEKLRRRIARLEAENAYLKKLRDLRNQRRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRARSSLNEQQREQLVECFEQGMGETAAANALGVPKNAVRLLYRRFQLHGRLCLVEKPTK
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCH
QQYSFEFKKEVVERHLSGETKMNLAREFNLSSDQLVSYWSRQWRKGGDEALKPKPKGRPK
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GSAVPKPLTEEEKLRRRIARLEAENAYLKKLRDLRNQRRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA