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The map label for this gene is lppS

Identifier: 68535585

GI number: 68535585

Start: 622379

End: 623587

Strand: Direct

Name: lppS

Synonym: jk0514

Alternate gene names: NA

Gene position: 622379-623587 (Clockwise)

Preceding gene: 68535580

Following gene: 68535587

Centisome position: 25.27

GC content: 59.8

Gene sequence:

>1209_bases
TTGCGCAACACCAAGGTTTTCGGAAAAACCTTTTCACGGACCACTGCGGCGTCCTTAAGCATCGCCCTAGTTACCTTCAC
CGCATCGTGCACAATCGACCGCGACAGCGACGACCCGCAGATCAGCTCTAATGCCTCAACCGGCGAGAACGGCGAGGGCG
AAGAGAAGAAGGATGAAAACAAGCTGACCTCCAACGTGAAGGACGGCGACACCGAGGTCGACGTCACCGAGCACGTGCAG
GTCAAGGGCGACAAGAAGATCGACAAGGTCTCGCTGACCAACGACGCAGGCGAGGAAGTCAAGGGTAAGTTCAACGAGGG
CAAGACCGAGTGGACCGTCCCCACCAAGCTCGGCTACTCGCGCACCTACACCCTCACTGCGAAGTCCGGCGACCAGAAGC
TCGAGCAGACCTTCACCACCATGACCCCCGGCATGACACTCAACGGCGCGCTCGCCCCGCTCGACGGCTCGACTGTGGGC
ATCGGCCAAACTATTTCTCTTCGTTTTGACGCCCCCGTGGAAGACCGCAAGGCAGTGGAAGATGCCATCACCGTGGAAAC
CACGCCGAAGGTGGAAGGAGCTTTCTACTGGATCACAGCCCAGGAAGTGCGCTGGCGCCCAGAGAAGTACTGGAAGCCCG
GCACCAAGGTCAACGTGAAGGCCAACCTGTACGGCACGAAGATTGGCGAGGGCGTGTACGGCGGTGAAGACCGCAGCGCG
AAGTTCACCATCGGTGACGCTATGCGTGCCATCGTGGACGACAGCACCAAGATGATGACCATCAAGAAGAACGGCAAGAC
CGTGCAGACCATGCCGGTTTCCCTGGGGCGCGACTACCAGTACCCCACGCCGAATGGAAAGTACATCATCGGTGACCAGT
TCGAGACACTGACCATGGACTCTTCGACGTTCGGCCTGACGGGCGCGGGCTCGTACGTGACGGACGTGCAGTACGCGACG
CAGATGAGCTACTCCGGCATTTACATCCACGCTGCGCCGTGGAGTGTGTACGCACAGGGCAACACCAACACTTCGCACGG
CTGCATCAACGTGAGCGTGGAGAACGCCGCATGGGTGTTTAACAACATGAAGCGCGGCGACATCGTTGAGGTGAAGAATA
CGCAGGGCGAGACCCTAAACGGCTCCGACGGCCTGGGGGACTGGAACATCCCGTGGAAGACCTGGAAGGCTGGGAACACG
GAGGGGTAG

Upstream 100 bases:

>100_bases
TGCCGGAACGCGCCGAAATAACTAACGCTCCCTTGTGGCCAAGCGATATGGTTTAGGACAGTCACTTTTACACACACTTT
GCCTCTTCTTGGAGTTAGTC

Downstream 100 bases:

>100_bases
CTAACGTCGGCTAGTGCAGGCTAGCACTAGCACTAGCAGTAGCGCAGGCGCGCGGCGCGGGGGACGGCGCGCGCGATGAT
CTTCGCCTTCTCGGCTCGCG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRNTKVFGKTFSRTTAASLSIALVTFTASCTIDRDSDDPQISSNASTGENGEGEEKKDENKLTSNVKDGDTEVDVTEHVQ
VKGDKKIDKVSLTNDAGEEVKGKFNEGKTEWTVPTKLGYSRTYTLTAKSGDQKLEQTFTTMTPGMTLNGALAPLDGSTVG
IGQTISLRFDAPVEDRKAVEDAITVETTPKVEGAFYWITAQEVRWRPEKYWKPGTKVNVKANLYGTKIGEGVYGGEDRSA
KFTIGDAMRAIVDDSTKMMTIKKNGKTVQTMPVSLGRDYQYPTPNGKYIIGDQFETLTMDSSTFGLTGAGSYVTDVQYAT
QMSYSGIYIHAAPWSVYAQGNTNTSHGCINVSVENAAWVFNNMKRGDIVEVKNTQGETLNGSDGLGDWNIPWKTWKAGNT
EG

Sequences:

>Translated_402_residues
MRNTKVFGKTFSRTTAASLSIALVTFTASCTIDRDSDDPQISSNASTGENGEGEEKKDENKLTSNVKDGDTEVDVTEHVQ
VKGDKKIDKVSLTNDAGEEVKGKFNEGKTEWTVPTKLGYSRTYTLTAKSGDQKLEQTFTTMTPGMTLNGALAPLDGSTVG
IGQTISLRFDAPVEDRKAVEDAITVETTPKVEGAFYWITAQEVRWRPEKYWKPGTKVNVKANLYGTKIGEGVYGGEDRSA
KFTIGDAMRAIVDDSTKMMTIKKNGKTVQTMPVSLGRDYQYPTPNGKYIIGDQFETLTMDSSTFGLTGAGSYVTDVQYAT
QMSYSGIYIHAAPWSVYAQGNTNTSHGCINVSVENAAWVFNNMKRGDIVEVKNTQGETLNGSDGLGDWNIPWKTWKAGNT
EG
>Mature_402_residues
MRNTKVFGKTFSRTTAASLSIALVTFTASCTIDRDSDDPQISSNASTGENGEGEEKKDENKLTSNVKDGDTEVDVTEHVQ
VKGDKKIDKVSLTNDAGEEVKGKFNEGKTEWTVPTKLGYSRTYTLTAKSGDQKLEQTFTTMTPGMTLNGALAPLDGSTVG
IGQTISLRFDAPVEDRKAVEDAITVETTPKVEGAFYWITAQEVRWRPEKYWKPGTKVNVKANLYGTKIGEGVYGGEDRSA
KFTIGDAMRAIVDDSTKMMTIKKNGKTVQTMPVSLGRDYQYPTPNGKYIIGDQFETLTMDSSTFGLTGAGSYVTDVQYAT
QMSYSGIYIHAAPWSVYAQGNTNTSHGCINVSVENAAWVFNNMKRGDIVEVKNTQGETLNGSDGLGDWNIPWKTWKAGNT
EG

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43858; Mature: 43858

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTKVFGKTFSRTTAASLSIALVTFTASCTIDRDSDDPQISSNASTGENGEGEEKKDEN
CCCCEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
KLTSNVKDGDTEVDVTEHVQVKGDKKIDKVSLTNDAGEEVKGKFNEGKTEWTVPTKLGYS
HHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCC
RTYTLTAKSGDQKLEQTFTTMTPGMTLNGALAPLDGSTVGIGQTISLRFDAPVEDRKAVE
EEEEEEECCCCHHHHHHHHHCCCCCEECCEEECCCCCEECCCEEEEEEECCCCCHHHHHH
DAITVETTPKVEGAFYWITAQEVRWRPEKYWKPGTKVNVKANLYGTKIGEGVYGGEDRSA
HEEEEEECCCCCEEEEEEEEHHHCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCE
KFTIGDAMRAIVDDSTKMMTIKKNGKTVQTMPVSLGRDYQYPTPNGKYIIGDQFETLTMD
EEEHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEC
SSTFGLTGAGSYVTDVQYATQMSYSGIYIHAAPWSVYAQGNTNTSHGCINVSVENAAWVF
CCCCCEECCCCHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCEEEEEECCEEEEE
NNMKRGDIVEVKNTQGETLNGSDGLGDWNIPWKTWKAGNTEG
CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MRNTKVFGKTFSRTTAASLSIALVTFTASCTIDRDSDDPQISSNASTGENGEGEEKKDEN
CCCCEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
KLTSNVKDGDTEVDVTEHVQVKGDKKIDKVSLTNDAGEEVKGKFNEGKTEWTVPTKLGYS
HHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCC
RTYTLTAKSGDQKLEQTFTTMTPGMTLNGALAPLDGSTVGIGQTISLRFDAPVEDRKAVE
EEEEEEECCCCHHHHHHHHHCCCCCEECCEEECCCCCEECCCEEEEEEECCCCCHHHHHH
DAITVETTPKVEGAFYWITAQEVRWRPEKYWKPGTKVNVKANLYGTKIGEGVYGGEDRSA
HEEEEEECCCCCEEEEEEEEHHHCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCE
KFTIGDAMRAIVDDSTKMMTIKKNGKTVQTMPVSLGRDYQYPTPNGKYIIGDQFETLTMD
EEEHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEEC
SSTFGLTGAGSYVTDVQYATQMSYSGIYIHAAPWSVYAQGNTNTSHGCINVSVENAAWVF
CCCCCEECCCCHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCEEEEEECCEEEEE
NNMKRGDIVEVKNTQGETLNGSDGLGDWNIPWKTWKAGNTEG
CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]