| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is 68535376
Identifier: 68535376
GI number: 68535376
Start: 378689
End: 379876
Strand: Direct
Name: 68535376
Synonym: jk0311
Alternate gene names: NA
Gene position: 378689-379876 (Clockwise)
Preceding gene: 68535375
Following gene: 68535378
Centisome position: 15.38
GC content: 57.83
Gene sequence:
>1188_bases ATGTCGAGGATTAACGCTCTCAACGTTGCTTTGGTGCTCGCGGCTTCTGTGCTTGGCTTGCTGAGCATTACACTCAACGC AAACCCGGTGCCTACGCAGGACAACGCGATCTCCAATAGCTTGGCCCTCTACTATTCGCTGGGGCCAATCCTTGGCTTTA TCGGCGCCAAAGAGATGGCACGCTTCCGTTCCTTTTTTAAGTCCCGCGGGTCTGTGCAGGATGTTTTTAAAGTCTGGCTC AGATCCTTGGCGCTGCCACTATTGCTTGCGGTGGTAGTGGTGCTGGCGTACCTCGCAGTGCAGTTGGCGGATATCGGCTA CGTAGAGTCCGGACGGTTCCTTGCAACAGGGTTGGTCTTTATTGCTCTTCACGGCGTGGCATGGCTGAGCTTGGGGGCAA CTTTAGGGCTGTACCTACCAGCAATTGTGGCGATCGCTGTCGGCTTGCTTCTTCCTTATATCCTGGTCGCTTACCCGGTG TCGCTCTCAAACGTGGCGTGGCGACAAATGTTCGGGCAGCCGTTCAGCTCCTGTTGCCAAGTATCACAGAGCGTGGACCC GATTCTGTGGAAGGCTTCGGCTCTGGTGCTGGGGGCCATATGCGTTTGCTCGTTGCTGTTGATCGCGGCTTTTCATGGAA ACTGGCTTCCGGGGTTGTCGGCGTGGCCACTTCGCGTGGCAGCCATTGGTCTATTCGGCGTGAGCTGTAGTTTAGGCTAC GGAATCGCCCAAGACGGAAACTACAGTTCCGCGGTGCCCCGCCCCCAAGAGCACATGATCTGCGAGGGAGCGGTGTGTTA CTGGCGCGAAACTCCATCTGGGCAGGTAGACGCTAACCGCAAGGTGTGGGAATCTTTGGGCGTCACTACCTATAGGCTGA TCGACGCCGAACCGCAACGGGACGACGACATCCGGCTCGCTCGCTCGGGTCAACAACCGGAAGTAAAGCACGCGCTCCTG GTCGAGCTCCTCAGCAATGAACCTGCACTTAAGGGGGCACCATCGTGTTGGGGGACCCCGCAGCAACCCGTATCCGTAGC GGAGTCTCTTCCCGATCTGACGGAAGAAGAGCTGGAACGAGCGACCTTGACGCCTTCCGGACAATGGCGCGGGGTGCATG GAACGAATGCGGGAGTGGACGTGAAGTTCATCCTGGATCGGGCGAACTCCGAGTGCTGGGAGGGATAG
Upstream 100 bases:
>100_bases TTTTTGCGAGTTGGGCGCGGTTCGCTAGAGCCGGGGGAGTCACATCGCTATTCCGACACTGTGAGAAACCTTGCGGAAGC ATTTTCCAGGACCGGTGGCC
Downstream 100 bases:
>100_bases TGTCTGCCCAACATCGAGTACAGATCTATTGGCGTGGACATTCCGCGACCTACGCGGTGATGCTTCAGATATTCGGCGTC GTGGGCGCCGTACTGTTCGG
Product: putative ABC transport system, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSRINALNVALVLAASVLGLLSITLNANPVPTQDNAISNSLALYYSLGPILGFIGAKEMARFRSFFKSRGSVQDVFKVWL RSLALPLLLAVVVVLAYLAVQLADIGYVESGRFLATGLVFIALHGVAWLSLGATLGLYLPAIVAIAVGLLLPYILVAYPV SLSNVAWRQMFGQPFSSCCQVSQSVDPILWKASALVLGAICVCSLLLIAAFHGNWLPGLSAWPLRVAAIGLFGVSCSLGY GIAQDGNYSSAVPRPQEHMICEGAVCYWRETPSGQVDANRKVWESLGVTTYRLIDAEPQRDDDIRLARSGQQPEVKHALL VELLSNEPALKGAPSCWGTPQQPVSVAESLPDLTEEELERATLTPSGQWRGVHGTNAGVDVKFILDRANSECWEG
Sequences:
>Translated_395_residues MSRINALNVALVLAASVLGLLSITLNANPVPTQDNAISNSLALYYSLGPILGFIGAKEMARFRSFFKSRGSVQDVFKVWL RSLALPLLLAVVVVLAYLAVQLADIGYVESGRFLATGLVFIALHGVAWLSLGATLGLYLPAIVAIAVGLLLPYILVAYPV SLSNVAWRQMFGQPFSSCCQVSQSVDPILWKASALVLGAICVCSLLLIAAFHGNWLPGLSAWPLRVAAIGLFGVSCSLGY GIAQDGNYSSAVPRPQEHMICEGAVCYWRETPSGQVDANRKVWESLGVTTYRLIDAEPQRDDDIRLARSGQQPEVKHALL VELLSNEPALKGAPSCWGTPQQPVSVAESLPDLTEEELERATLTPSGQWRGVHGTNAGVDVKFILDRANSECWEG >Mature_394_residues SRINALNVALVLAASVLGLLSITLNANPVPTQDNAISNSLALYYSLGPILGFIGAKEMARFRSFFKSRGSVQDVFKVWLR SLALPLLLAVVVVLAYLAVQLADIGYVESGRFLATGLVFIALHGVAWLSLGATLGLYLPAIVAIAVGLLLPYILVAYPVS LSNVAWRQMFGQPFSSCCQVSQSVDPILWKASALVLGAICVCSLLLIAAFHGNWLPGLSAWPLRVAAIGLFGVSCSLGYG IAQDGNYSSAVPRPQEHMICEGAVCYWRETPSGQVDANRKVWESLGVTTYRLIDAEPQRDDDIRLARSGQQPEVKHALLV ELLSNEPALKGAPSCWGTPQQPVSVAESLPDLTEEELERATLTPSGQWRGVHGTNAGVDVKFILDRANSECWEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42459; Mature: 42327
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRINALNVALVLAASVLGLLSITLNANPVPTQDNAISNSLALYYSLGPILGFIGAKEMA CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFRSFFKSRGSVQDVFKVWLRSLALPLLLAVVVVLAYLAVQLADIGYVESGRFLATGLVF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IALHGVAWLSLGATLGLYLPAIVAIAVGLLLPYILVAYPVSLSNVAWRQMFGQPFSSCCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VSQSVDPILWKASALVLGAICVCSLLLIAAFHGNWLPGLSAWPLRVAAIGLFGVSCSLGY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GIAQDGNYSSAVPRPQEHMICEGAVCYWRETPSGQVDANRKVWESLGVTTYRLIDAEPQR CCCCCCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCC DDDIRLARSGQQPEVKHALLVELLSNEPALKGAPSCWGTPQQPVSVAESLPDLTEEELER CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHH ATLTPSGQWRGVHGTNAGVDVKFILDRANSECWEG HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure SRINALNVALVLAASVLGLLSITLNANPVPTQDNAISNSLALYYSLGPILGFIGAKEMA CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RFRSFFKSRGSVQDVFKVWLRSLALPLLLAVVVVLAYLAVQLADIGYVESGRFLATGLVF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IALHGVAWLSLGATLGLYLPAIVAIAVGLLLPYILVAYPVSLSNVAWRQMFGQPFSSCCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH VSQSVDPILWKASALVLGAICVCSLLLIAAFHGNWLPGLSAWPLRVAAIGLFGVSCSLGY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GIAQDGNYSSAVPRPQEHMICEGAVCYWRETPSGQVDANRKVWESLGVTTYRLIDAEPQR CCCCCCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCC DDDIRLARSGQQPEVKHALLVELLSNEPALKGAPSCWGTPQQPVSVAESLPDLTEEELER CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHH ATLTPSGQWRGVHGTNAGVDVKFILDRANSECWEG HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA