| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is pck
Identifier: 68535216
GI number: 68535216
Start: 183533
End: 185353
Strand: Direct
Name: pck
Synonym: jk0151
Alternate gene names: 68535216
Gene position: 183533-185353 (Clockwise)
Preceding gene: 68535215
Following gene: 68535218
Centisome position: 7.45
GC content: 63.54
Gene sequence:
>1821_bases ATGACCATTCGAGGGCTTGTCGGCGAGGCACCCACCAAGAACCAGGAGATGCTGAACTGGATCGAGGAGGCCGTGGAGCT CTTCCAGCCAGAATCAGTCGTGTTCTGCGATGGCTCCGAGGAGGAGTGGAACGAGCTGGCAGAGCAGCTGGTCGAGCACG GCACCCTGATCAAGCTGGACGAAGAGGCGCAGCCGAACTCCTTCCTGGCGCGCTCCAACCCGTCTGACGTTGCGCGCGTG GAATCCCGCACCTTCATCTGCTCTAAGACTGAGGAAGACGCCGGCCCCACCAACAACTGGATGGACCCGGAGCAGATGCG TGCCGAGATGCGCGAGCACTTCTCCGGCTCCATGAAGGGCCGCCGCATGTACATCGTGCCTTTCTGCATGGGCCCGATTA CCGACCCGTCCCCGAAGCTGGGTATCGAAATCACCGACTCCCCGTACGTTGTTATGTCCATGCGCATCATGACCCGTATG GGTAAGGAAGCTCTGGACAAGATCGGCGAGAACGGCGAGTTCGTGAAGGGTCTGCACTCCGTGGGCGCCCCGCTGGAGCC GGGTCAGGAAGACTCGACCTGGCCGTGCAATGACACGAAGTACATCACCCACTTCCCGGAGGACCGCGAGATCTGGTCCT ACGGCTCCGGCTACGGTGGCAACGCCATCCTGGCTAAGAAGTGCTACGCGCTGCGCATCGCTTCCGCCATGGCGCGCGAC GAGGGCTGGATGGCAGAGCACATGCTGATCCTGAAGCTGATCAGCCCGGAGGACAAGGCCTACTACATCTGTGCTGCCTT CCCATCCGCTTGTGGCAAGACCAACCTGGCCATGATCCAGCCGACCATCCCGGGCTGGCGCGCAGAGGTCGTCGGCGACG ATATCGCATGGCTGCACTTCGGCGAGGACGGCCGCCTGTACGCAGTGAACCCGGAGAATGGTTTCTTCGGCGTGGCACCA GGCACCAACTACGCTTCCAACCCGATGGCCATGAAGTCCATGGAGCCGGGCAACACCCTGTACACCAACGTGGCCCTGAC TGACGACAACAACGTCTGGTGGGAGTCCAAGGAAGGCGAGCCGCAGCACCTCATCGACTGGCTGGGCAACGAGTGGACCC CGGATTCCGGCAACAAGGCCGCGCACCCGAACTCCCGCTACTGCGTGCCGATCGAGCAGTGCCCGGTTGCTGCACCGGAG TTCAACGACCCGAAGGGCGTGCCGGTTTCCGCCATCCTGTTCGGCGGTCGCCGTGCGGACACTGTGCCGCTGGTGACCCA GGCTCGCGACTGGAACCACGCCACCTTCATCGGCGCCACCCTGGCTTCCGGCCAGACCGCCGCTGCTGCGGAGGCCGCCG TTGGCTCCCTGCGTCACGACCCGATGGCCATGCTGCCGTTCATCGGCTACAACGCCGGTGACTACCTGCAGCACTGGATC GACATGGGCAATAAGGGCGGCGACAAGATGCCAGAGGTCTTCCTGGTCAACTGGTTCCGCCGTGGTGAGGACGGCCGTTT CCTGTGGCCGGGCTTCGGCGAGAACTCCCGCGTGCTGAAGTGGATCATCGACCGCATCGAGGGCCGCGTAGAGGCCGACG AGACCGTCGTTGGCTACACCGCCCGCTACGAGGACATCTACACCGATGGCCTGAAGGAGACCGAGGAGGACATCCGCGAG GCACTGTCCGTGAACCCGGCTGACTGGGAGCGCGACCTGGCCGACAATGAGGAGTGGCTGAAGTTCCTGGGCCCGAAGGT TCCGTCCGAGGTATGGGACGAGTTCCAGGGTCTGAAGGATCGCGTGGAGGCTGCGAAGTAG
Upstream 100 bases:
>100_bases GGTTTGAACTGGACGTTTAAACCGACGGTCGGCTGGTGCATGTTTGTGCGCCTTTTGGTCGGGCCGGGTTGTGGGACACA AAAACGTAGGGAGATAATCG
Downstream 100 bases:
>100_bases CTGCTAGTTGCGCTAGACGCTGCGCCTGATGGCGCTGCGTAGCGCTAGTAGCTCGCGTGCAGTGCTGGTAGCTCGCGTCC GCGAGCGTGCTGGTGCTAGG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MTIRGLVGEAPTKNQEMLNWIEEAVELFQPESVVFCDGSEEEWNELAEQLVEHGTLIKLDEEAQPNSFLARSNPSDVARV ESRTFICSKTEEDAGPTNNWMDPEQMRAEMREHFSGSMKGRRMYIVPFCMGPITDPSPKLGIEITDSPYVVMSMRIMTRM GKEALDKIGENGEFVKGLHSVGAPLEPGQEDSTWPCNDTKYITHFPEDREIWSYGSGYGGNAILAKKCYALRIASAMARD EGWMAEHMLILKLISPEDKAYYICAAFPSACGKTNLAMIQPTIPGWRAEVVGDDIAWLHFGEDGRLYAVNPENGFFGVAP GTNYASNPMAMKSMEPGNTLYTNVALTDDNNVWWESKEGEPQHLIDWLGNEWTPDSGNKAAHPNSRYCVPIEQCPVAAPE FNDPKGVPVSAILFGGRRADTVPLVTQARDWNHATFIGATLASGQTAAAAEAAVGSLRHDPMAMLPFIGYNAGDYLQHWI DMGNKGGDKMPEVFLVNWFRRGEDGRFLWPGFGENSRVLKWIIDRIEGRVEADETVVGYTARYEDIYTDGLKETEEDIRE ALSVNPADWERDLADNEEWLKFLGPKVPSEVWDEFQGLKDRVEAAK
Sequences:
>Translated_606_residues MTIRGLVGEAPTKNQEMLNWIEEAVELFQPESVVFCDGSEEEWNELAEQLVEHGTLIKLDEEAQPNSFLARSNPSDVARV ESRTFICSKTEEDAGPTNNWMDPEQMRAEMREHFSGSMKGRRMYIVPFCMGPITDPSPKLGIEITDSPYVVMSMRIMTRM GKEALDKIGENGEFVKGLHSVGAPLEPGQEDSTWPCNDTKYITHFPEDREIWSYGSGYGGNAILAKKCYALRIASAMARD EGWMAEHMLILKLISPEDKAYYICAAFPSACGKTNLAMIQPTIPGWRAEVVGDDIAWLHFGEDGRLYAVNPENGFFGVAP GTNYASNPMAMKSMEPGNTLYTNVALTDDNNVWWESKEGEPQHLIDWLGNEWTPDSGNKAAHPNSRYCVPIEQCPVAAPE FNDPKGVPVSAILFGGRRADTVPLVTQARDWNHATFIGATLASGQTAAAAEAAVGSLRHDPMAMLPFIGYNAGDYLQHWI DMGNKGGDKMPEVFLVNWFRRGEDGRFLWPGFGENSRVLKWIIDRIEGRVEADETVVGYTARYEDIYTDGLKETEEDIRE ALSVNPADWERDLADNEEWLKFLGPKVPSEVWDEFQGLKDRVEAAK >Mature_605_residues TIRGLVGEAPTKNQEMLNWIEEAVELFQPESVVFCDGSEEEWNELAEQLVEHGTLIKLDEEAQPNSFLARSNPSDVARVE SRTFICSKTEEDAGPTNNWMDPEQMRAEMREHFSGSMKGRRMYIVPFCMGPITDPSPKLGIEITDSPYVVMSMRIMTRMG KEALDKIGENGEFVKGLHSVGAPLEPGQEDSTWPCNDTKYITHFPEDREIWSYGSGYGGNAILAKKCYALRIASAMARDE GWMAEHMLILKLISPEDKAYYICAAFPSACGKTNLAMIQPTIPGWRAEVVGDDIAWLHFGEDGRLYAVNPENGFFGVAPG TNYASNPMAMKSMEPGNTLYTNVALTDDNNVWWESKEGEPQHLIDWLGNEWTPDSGNKAAHPNSRYCVPIEQCPVAAPEF NDPKGVPVSAILFGGRRADTVPLVTQARDWNHATFIGATLASGQTAAAAEAAVGSLRHDPMAMLPFIGYNAGDYLQHWID MGNKGGDKMPEVFLVNWFRRGEDGRFLWPGFGENSRVLKWIIDRIEGRVEADETVVGYTARYEDIYTDGLKETEEDIREA LSVNPADWERDLADNEEWLKFLGPKVPSEVWDEFQGLKDRVEAAK
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family
Homologues:
Organism=Homo sapiens, GI66346721, Length=618, Percent_Identity=47.411003236246, Blast_Score=572, Evalue=1e-163, Organism=Homo sapiens, GI187281517, Length=618, Percent_Identity=46.6019417475728, Blast_Score=570, Evalue=1e-162, Organism=Homo sapiens, GI66346723, Length=409, Percent_Identity=48.1662591687042, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17555492, Length=624, Percent_Identity=47.275641025641, Blast_Score=566, Evalue=1e-161, Organism=Caenorhabditis elegans, GI71989645, Length=620, Percent_Identity=47.0967741935484, Blast_Score=554, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989658, Length=620, Percent_Identity=47.0967741935484, Blast_Score=553, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989653, Length=595, Percent_Identity=47.7310924369748, Blast_Score=546, Evalue=1e-155, Organism=Caenorhabditis elegans, GI32564411, Length=545, Percent_Identity=49.9082568807339, Blast_Score=543, Evalue=1e-155, Organism=Caenorhabditis elegans, GI32564407, Length=524, Percent_Identity=50.381679389313, Blast_Score=511, Evalue=1e-145, Organism=Caenorhabditis elegans, GI71989649, Length=519, Percent_Identity=47.7842003853565, Blast_Score=492, Evalue=1e-139, Organism=Caenorhabditis elegans, GI32564409, Length=370, Percent_Identity=47.2972972972973, Blast_Score=335, Evalue=6e-92, Organism=Caenorhabditis elegans, GI17540956, Length=577, Percent_Identity=23.2235701906412, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI24655085, Length=598, Percent_Identity=48.494983277592, Blast_Score=590, Evalue=1e-169, Organism=Drosophila melanogaster, GI24655082, Length=610, Percent_Identity=48.8524590163934, Blast_Score=581, Evalue=1e-166, Organism=Drosophila melanogaster, GI161077226, Length=568, Percent_Identity=49.6478873239437, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI24655088, Length=503, Percent_Identity=49.3041749502982, Blast_Score=514, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PCKG_CORJK (Q4JY04)
Other databases:
- EMBL: CR931997 - RefSeq: YP_249921.1 - ProteinModelPortal: Q4JY04 - SMR: Q4JY04 - STRING: Q4JY04 - GeneID: 3432866 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0151 - NMPDR: fig|306537.3.peg.225 - eggNOG: COG1274 - HOGENOM: HBG484437 - OMA: WILERVE - ProtClustDB: PRK04210 - BioCyc: CJEI306537:JK0151-MONOMER - GO: GO:0005737 - GO: GO:0006094 - HAMAP: MF_00452 - InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 - Gene3D: G3DSA:3.90.228.20 - Gene3D: G3DSA:3.40.449.10 - PANTHER: PTHR11561 - PIRSF: PIRSF001348
Pfam domain/function: PF00821 PEPCK; SSF68923 PEP_carboxykinase_N
EC number: =4.1.1.32
Molecular weight: Translated: 67734; Mature: 67602
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00505 PEPCK_GTP
Important sites: ACT_SITE 271-271 BINDING 79-79 BINDING 220-220 BINDING 227-227 BINDING 269-269 BINDING 386-386 BINDING 417-417
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRGLVGEAPTKNQEMLNWIEEAVELFQPESVVFCDGSEEEWNELAEQLVEHGTLIKLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEC EEAQPNSFLARSNPSDVARVESRTFICSKTEEDAGPTNNWMDPEQMRAEMREHFSGSMKG CCCCCCCEEECCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC RRMYIVPFCMGPITDPSPKLGIEITDSPYVVMSMRIMTRMGKEALDKIGENGEFVKGLHS CEEEEEEEECCCCCCCCCCCEEEECCCCEEEHHHHHHHHHCHHHHHHHCCCCHHHHHHHH VGAPLEPGQEDSTWPCNDTKYITHFPEDREIWSYGSGYGGNAILAKKCYALRIASAMARD CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC EGWMAEHMLILKLISPEDKAYYICAAFPSACGKTNLAMIQPTIPGWRAEVVGDDIAWLHF CCHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEE GEDGRLYAVNPENGFFGVAPGTNYASNPMAMKSMEPGNTLYTNVALTDDNNVWWESKEGE CCCCEEEEECCCCCEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCC PQHLIDWLGNEWTPDSGNKAAHPNSRYCVPIEQCPVAAPEFNDPKGVPVSAILFGGRRAD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCC TVPLVTQARDWNHATFIGATLASGQTAAAAEAAVGSLRHDPMAMLPFIGYNAGDYLQHWI CCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHEHHHCCCCHHHHHHHHH DMGNKGGDKMPEVFLVNWFRRGEDGRFLWPGFGENSRVLKWIIDRIEGRVEADETVVGYT HCCCCCCCCCCHHHEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE ARYEDIYTDGLKETEEDIREALSVNPADWERDLADNEEWLKFLGPKVPSEVWDEFQGLKD EHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH RVEAAK HHHHCC >Mature Secondary Structure TIRGLVGEAPTKNQEMLNWIEEAVELFQPESVVFCDGSEEEWNELAEQLVEHGTLIKLD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEC EEAQPNSFLARSNPSDVARVESRTFICSKTEEDAGPTNNWMDPEQMRAEMREHFSGSMKG CCCCCCCEEECCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC RRMYIVPFCMGPITDPSPKLGIEITDSPYVVMSMRIMTRMGKEALDKIGENGEFVKGLHS CEEEEEEEECCCCCCCCCCCEEEECCCCEEEHHHHHHHHHCHHHHHHHCCCCHHHHHHHH VGAPLEPGQEDSTWPCNDTKYITHFPEDREIWSYGSGYGGNAILAKKCYALRIASAMARD CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC EGWMAEHMLILKLISPEDKAYYICAAFPSACGKTNLAMIQPTIPGWRAEVVGDDIAWLHF CCHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEE GEDGRLYAVNPENGFFGVAPGTNYASNPMAMKSMEPGNTLYTNVALTDDNNVWWESKEGE CCCCEEEEECCCCCEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCC PQHLIDWLGNEWTPDSGNKAAHPNSRYCVPIEQCPVAAPEFNDPKGVPVSAILFGGRRAD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCC TVPLVTQARDWNHATFIGATLASGQTAAAAEAAVGSLRHDPMAMLPFIGYNAGDYLQHWI CCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHEHHHCCCCHHHHHHHHH DMGNKGGDKMPEVFLVNWFRRGEDGRFLWPGFGENSRVLKWIIDRIEGRVEADETVVGYT HCCCCCCCCCCHHHEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE ARYEDIYTDGLKETEEDIREALSVNPADWERDLADNEEWLKFLGPKVPSEVWDEFQGLKD EHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH RVEAAK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA