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The map label for this gene is yitU [H]

Identifier: 68535190

GI number: 68535190

Start: 145480

End: 146298

Strand: Direct

Name: yitU [H]

Synonym: jk0125

Alternate gene names: 68535190

Gene position: 145480-146298 (Clockwise)

Preceding gene: 68535189

Following gene: 68535191

Centisome position: 5.91

GC content: 64.47

Gene sequence:

>819_bases
ATGCAGGATTCCCCGTTGCTGGTGGTCAGCGACGTTGACGGCACCCTTCTCAACAGCAGGGAGCGGGTCTCGCAGCGGAT
GCGTCGCGCGGTGAGTTCGATGCTGCGCCAGGGCACCGTCTTCACCATCGCCACAGGCCGCCCGCCGCGCTGGCTGATGC
CCGTATTCGAGCAGCTGCCTGTCCGGCCCGTCTGTGCCTGCGCCAACGGCGCCATTATTTATGACGCCGACCGGGATCAG
ATCGTGCACGCCGCGACCCTCGAGCCGGAACTCATCCGCACTCTCATTGCACAGCTCAGTGAGTCCGTCCCCGGGGTGGG
TTTCGCCGTCGAGCGCGCCGGGACTAGCGCCTTTGACCGCGCCGACGAGCTATTTTCCGTCTCGCCCGGTTACGACCACG
CCTGGGATTCTACCGAGCATGCTGTCCAGTCCCTCGCCGAACTTGCTGCCACGCCTGTGGTGAAGCTGCTGGTCCGGGAC
CCCAATCGGACGTCGGCCGAGCTCTTTGCCGCGGTGCGCCCTTTTATTGACGCCACCCAGGCGAAAGCCACCTACAGCTA
TGAAGGGGGTCTAGTAGAGGTCTCGGCGGCGGGAATCTCCAAGCGCTCCGCGCTGGAATGGATCGCCGAACAGGTCGGTG
TGGATGCCGCACAGACCATTGCCTTCGGGGACATGCCCAATGACACGGAGATGCTGACCTGGGCGGGGCACGGTGTGGCG
ATGGGCAATGCCGAAGAATCGCTGAAAGAAGTCGCCGACGAAGTCACCCTGACGAATGACGAGGACGGCGTGGCCGCCGT
CCTCGAGCGGTGGTTTTAG

Upstream 100 bases:

>100_bases
CGCCGAGGCCCGCGAACGCGAGCAGGCCACTGGCATCAACAAGATCCTGGTGCCGCTGCGCCAGCGCATTAACCGTCTGC
GCAAAAAGTAGGCCCGAGCA

Downstream 100 bases:

>100_bases
GTAGCCATGTCCAAGCTGAGCGAAAACGTACGTCGGAAGGTAGCCCAGCTGCAGGTGCGTCACGAGGGCTTGAAGAAGAA
AAGCTACGGTTTCCTAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MQDSPLLVVSDVDGTLLNSRERVSQRMRRAVSSMLRQGTVFTIATGRPPRWLMPVFEQLPVRPVCACANGAIIYDADRDQ
IVHAATLEPELIRTLIAQLSESVPGVGFAVERAGTSAFDRADELFSVSPGYDHAWDSTEHAVQSLAELAATPVVKLLVRD
PNRTSAELFAAVRPFIDATQAKATYSYEGGLVEVSAAGISKRSALEWIAEQVGVDAAQTIAFGDMPNDTEMLTWAGHGVA
MGNAEESLKEVADEVTLTNDEDGVAAVLERWF

Sequences:

>Translated_272_residues
MQDSPLLVVSDVDGTLLNSRERVSQRMRRAVSSMLRQGTVFTIATGRPPRWLMPVFEQLPVRPVCACANGAIIYDADRDQ
IVHAATLEPELIRTLIAQLSESVPGVGFAVERAGTSAFDRADELFSVSPGYDHAWDSTEHAVQSLAELAATPVVKLLVRD
PNRTSAELFAAVRPFIDATQAKATYSYEGGLVEVSAAGISKRSALEWIAEQVGVDAAQTIAFGDMPNDTEMLTWAGHGVA
MGNAEESLKEVADEVTLTNDEDGVAAVLERWF
>Mature_272_residues
MQDSPLLVVSDVDGTLLNSRERVSQRMRRAVSSMLRQGTVFTIATGRPPRWLMPVFEQLPVRPVCACANGAIIYDADRDQ
IVHAATLEPELIRTLIAQLSESVPGVGFAVERAGTSAFDRADELFSVSPGYDHAWDSTEHAVQSLAELAATPVVKLLVRD
PNRTSAELFAAVRPFIDATQAKATYSYEGGLVEVSAAGISKRSALEWIAEQVGVDAAQTIAFGDMPNDTEMLTWAGHGVA
MGNAEESLKEVADEVTLTNDEDGVAAVLERWF

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=282, Percent_Identity=25.886524822695, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI2367265, Length=280, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29418; Mature: 29418

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSPLLVVSDVDGTLLNSRERVSQRMRRAVSSMLRQGTVFTIATGRPPRWLMPVFEQLP
CCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
VRPVCACANGAIIYDADRDQIVHAATLEPELIRTLIAQLSESVPGVGFAVERAGTSAFDR
CCHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHH
ADELFSVSPGYDHAWDSTEHAVQSLAELAATPVVKLLVRDPNRTSAELFAAVRPFIDATQ
HHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
AKATYSYEGGLVEVSAAGISKRSALEWIAEQVGVDAAQTIAFGDMPNDTEMLTWAGHGVA
HCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCCCEEEEECCCEE
MGNAEESLKEVADEVTLTNDEDGVAAVLERWF
ECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MQDSPLLVVSDVDGTLLNSRERVSQRMRRAVSSMLRQGTVFTIATGRPPRWLMPVFEQLP
CCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
VRPVCACANGAIIYDADRDQIVHAATLEPELIRTLIAQLSESVPGVGFAVERAGTSAFDR
CCHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHH
ADELFSVSPGYDHAWDSTEHAVQSLAELAATPVVKLLVRDPNRTSAELFAAVRPFIDATQ
HHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
AKATYSYEGGLVEVSAAGISKRSALEWIAEQVGVDAAQTIAFGDMPNDTEMLTWAGHGVA
HCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCCCEEEEECCCEE
MGNAEESLKEVADEVTLTNDEDGVAAVLERWF
ECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]