Click here to switch to the map view.

The map label for this gene is 68535174

Identifier: 68535174

GI number: 68535174

Start: 129009

End: 130478

Strand: Direct

Name: 68535174

Synonym: jk0109

Alternate gene names: NA

Gene position: 129009-130478 (Clockwise)

Preceding gene: 68535169

Following gene: 68535175

Centisome position: 5.24

GC content: 65.65

Gene sequence:

>1470_bases
GTGTTTCGCTGTCTGCCGAGTAGGCCGCGGATGGGCGACAAAGTGTTCCCCACCAGGGTGGATATCGACCCTAGCGAGCC
CGACACAGCCGTTGAGCAGACCTTGGAGGCACTGGCTTCGGGCGCTCGCCTGATCACCCGTCCCGTGTTGGCCGAAGGTC
CTTTCCGGGTGGAGCTGGACCTGCTGGTTCGCGCGGACCTTGGCAAGGGGGTCGACGAGTTTATGCAGTACACCCCTGTC
GCCATCTCCTCGCACTCCGTGGCACGTCGCGCGCGAGCCACGCAGCTGGCGGACTGTCGAGTGGCGGACATAGGTGCGCT
GGGCTTGGCCGTGCCGGCGCCTATCGACTTCCGCCACCGCGCTGCCGCCGGAGACGCCCAAAAAGTGGCCATTGCCCACG
TTGTGCTGCGGAAGTGGGGCTTTGCCGCCAGCACCGTCGCGCTGATCGGGCGCGCCGGGCCGGGTAGGCCTCGTTGCTTC
TTTTTTGACGCCCCCTCTGTCCTCCCCGGCCTGCAGGCCGCGTTGGAGGAACCGATCCCGACCGAGCCACGCAGAATCAA
GGAATGCCAGACCTGCGAGTTTCATAATCACTGCCGGGCCCAATTGCTGCAGAGCCAGGAGATCAGCCTGCTGCTGCCGG
GGGACAAGGCCCGCAAGTGGCGGGAAAAAGGGATAGAAACTCTGCCGCAGCTGGCGGCCTCCGGTAACGGGGAACAGTCA
GAGCTGGCACAGGCCTGGATGGACGGGCAAGTGGCCCTTCGCCGCCCGAAGAAAAACTGGCTGGAGCAGCCGGAGCTTTG
GGGCGGTAGCGCGCGGAATGCCGCCGGAGATCTGCGCGACTGGGTGGAGATCGACGTGGACATGGAGGCCCACCCCAACC
GTGGCACTTTCCTTTGGGGTACTTTCGACGGTTCGCGCTACATCGGGTTTGGGGATTTCAGCCGGGACGGCGATGAAGGC
CAACACGTCGCCGAGTTCTGGCACTGGCTGCAATTGCAGAAGGATCGCGCCCTGGAGAAAGGAAAGAGCTTCCAGGTGTG
GGTGTATGCCGCGCAGGGGGAAAACTACTGGCTGCGCCATGCCGCCGAGCGTTACGGCGGGCACCGTTACGAGGTCGCGG
GCACCAACGTGAAGGTGACCATGCCCACGTTGGAGGAGGTGAATGCCTTCATCGCCTCCGAGCACTGGTGCGATTGCTTC
GGCCTGGTGAAGAAGGCGCTGGCGCCCACGGACTCGCTGGGGCTAAAGACGGTGGCGCCGCTGGCGGGATTCGAGTTCAG
CCAGGCGGGCATCAACGGCAAGGCAGCGGTGGAACTATTTGAGCAGGCCATCGGCGGATCCCGCACCACGGCGCAGGCGG
CCAGGCGTAAGCTGGAGCGCTACAACGCCGACGACTGCGTGGCGACCTCGGCGGTTCGCGCCTGGCTGCGCCGGGGCGCG
CCGGGCCTGCGGGAACTGCGGCGTCAATAA

Upstream 100 bases:

>100_bases
GGAACCACCTGTTGCCCCGCGCATCCATACCGCGCAGGATCTCGAGGCCTACGTGGAGTCCGTTCAGCACAAAGCCACCG
CGGCGCTCCGCCGGGAACAG

Downstream 100 bases:

>100_bases
AAAAGAGGACAAGATATGACGAACTTCTTCGACCGCATTATGGCACTCAACAGCAAAGGACCGTACCGGGCCGAAAGAGT
CGGGCCGGAGGATGCACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease; Nuclease-Like Protein

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MFRCLPSRPRMGDKVFPTRVDIDPSEPDTAVEQTLEALASGARLITRPVLAEGPFRVELDLLVRADLGKGVDEFMQYTPV
AISSHSVARRARATQLADCRVADIGALGLAVPAPIDFRHRAAAGDAQKVAIAHVVLRKWGFAASTVALIGRAGPGRPRCF
FFDAPSVLPGLQAALEEPIPTEPRRIKECQTCEFHNHCRAQLLQSQEISLLLPGDKARKWREKGIETLPQLAASGNGEQS
ELAQAWMDGQVALRRPKKNWLEQPELWGGSARNAAGDLRDWVEIDVDMEAHPNRGTFLWGTFDGSRYIGFGDFSRDGDEG
QHVAEFWHWLQLQKDRALEKGKSFQVWVYAAQGENYWLRHAAERYGGHRYEVAGTNVKVTMPTLEEVNAFIASEHWCDCF
GLVKKALAPTDSLGLKTVAPLAGFEFSQAGINGKAAVELFEQAIGGSRTTAQAARRKLERYNADDCVATSAVRAWLRRGA
PGLRELRRQ

Sequences:

>Translated_489_residues
MFRCLPSRPRMGDKVFPTRVDIDPSEPDTAVEQTLEALASGARLITRPVLAEGPFRVELDLLVRADLGKGVDEFMQYTPV
AISSHSVARRARATQLADCRVADIGALGLAVPAPIDFRHRAAAGDAQKVAIAHVVLRKWGFAASTVALIGRAGPGRPRCF
FFDAPSVLPGLQAALEEPIPTEPRRIKECQTCEFHNHCRAQLLQSQEISLLLPGDKARKWREKGIETLPQLAASGNGEQS
ELAQAWMDGQVALRRPKKNWLEQPELWGGSARNAAGDLRDWVEIDVDMEAHPNRGTFLWGTFDGSRYIGFGDFSRDGDEG
QHVAEFWHWLQLQKDRALEKGKSFQVWVYAAQGENYWLRHAAERYGGHRYEVAGTNVKVTMPTLEEVNAFIASEHWCDCF
GLVKKALAPTDSLGLKTVAPLAGFEFSQAGINGKAAVELFEQAIGGSRTTAQAARRKLERYNADDCVATSAVRAWLRRGA
PGLRELRRQ
>Mature_489_residues
MFRCLPSRPRMGDKVFPTRVDIDPSEPDTAVEQTLEALASGARLITRPVLAEGPFRVELDLLVRADLGKGVDEFMQYTPV
AISSHSVARRARATQLADCRVADIGALGLAVPAPIDFRHRAAAGDAQKVAIAHVVLRKWGFAASTVALIGRAGPGRPRCF
FFDAPSVLPGLQAALEEPIPTEPRRIKECQTCEFHNHCRAQLLQSQEISLLLPGDKARKWREKGIETLPQLAASGNGEQS
ELAQAWMDGQVALRRPKKNWLEQPELWGGSARNAAGDLRDWVEIDVDMEAHPNRGTFLWGTFDGSRYIGFGDFSRDGDEG
QHVAEFWHWLQLQKDRALEKGKSFQVWVYAAQGENYWLRHAAERYGGHRYEVAGTNVKVTMPTLEEVNAFIASEHWCDCF
GLVKKALAPTDSLGLKTVAPLAGFEFSQAGINGKAAVELFEQAIGGSRTTAQAARRKLERYNADDCVATSAVRAWLRRGA
PGLRELRRQ

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54086; Mature: 54086

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRCLPSRPRMGDKVFPTRVDIDPSEPDTAVEQTLEALASGARLITRPVLAEGPFRVELD
CCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
LLVRADLGKGVDEFMQYTPVAISSHSVARRARATQLADCRVADIGALGLAVPAPIDFRHR
EEEECHHCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHH
AAAGDAQKVAIAHVVLRKWGFAASTVALIGRAGPGRPRCFFFDAPSVLPGLQAALEEPIP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC
TEPRRIKECQTCEFHNHCRAQLLQSQEISLLLPGDKARKWREKGIETLPQLAASGNGEQS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH
ELAQAWMDGQVALRRPKKNWLEQPELWGGSARNAAGDLRDWVEIDVDMEAHPNRGTFLWG
HHHHHHCCCHHEEECCHHHHCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEE
TFDGSRYIGFGDFSRDGDEGQHVAEFWHWLQLQKDRALEKGKSFQVWVYAAQGENYWLRH
ECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH
AAERYGGHRYEVAGTNVKVTMPTLEEVNAFIASEHWCDCFGLVKKALAPTDSLGLKTVAP
HHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LAGFEFSQAGINGKAAVELFEQAIGGSRTTAQAARRKLERYNADDCVATSAVRAWLRRGA
HCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PGLRELRRQ
CCHHHHHCC
>Mature Secondary Structure
MFRCLPSRPRMGDKVFPTRVDIDPSEPDTAVEQTLEALASGARLITRPVLAEGPFRVELD
CCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
LLVRADLGKGVDEFMQYTPVAISSHSVARRARATQLADCRVADIGALGLAVPAPIDFRHR
EEEECHHCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHH
AAAGDAQKVAIAHVVLRKWGFAASTVALIGRAGPGRPRCFFFDAPSVLPGLQAALEEPIP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC
TEPRRIKECQTCEFHNHCRAQLLQSQEISLLLPGDKARKWREKGIETLPQLAASGNGEQS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHH
ELAQAWMDGQVALRRPKKNWLEQPELWGGSARNAAGDLRDWVEIDVDMEAHPNRGTFLWG
HHHHHHCCCHHEEECCHHHHCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEE
TFDGSRYIGFGDFSRDGDEGQHVAEFWHWLQLQKDRALEKGKSFQVWVYAAQGENYWLRH
ECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH
AAERYGGHRYEVAGTNVKVTMPTLEEVNAFIASEHWCDCFGLVKKALAPTDSLGLKTVAP
HHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LAGFEFSQAGINGKAAVELFEQAIGGSRTTAQAARRKLERYNADDCVATSAVRAWLRRGA
HCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PGLRELRRQ
CCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA