| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is mcbR
Identifier: 68535166
GI number: 68535166
Start: 122120
End: 122875
Strand: Direct
Name: mcbR
Synonym: jk0101
Alternate gene names: NA
Gene position: 122120-122875 (Clockwise)
Preceding gene: 68535165
Following gene: 68535168
Centisome position: 4.96
GC content: 59.26
Gene sequence:
>756_bases ATGGCAACGGCAGAGGATAAACCCCGCACGGCGGGCTCCGCGGCCTCTACTAACTCCTCGGCCAAGGCAGCAGCCAAGAC ATCGGGAGCAAAGACGGCCAAGAAGGTCGCGAAGAAGACGGCCAAGAAGACCGGTAAGGCCACAAAGCAGACAGCGCGCT CCAGTCGACGTAACCGTCCTGGACCGCGCCAAAGACTGCTGGCAAGCGCGACGAACCTCTTTACCACGCAAGGCATCCGT GTTATCGGCATCGATCGCATCCTGCGAGACGCAGACGTGGCGAAGGCCAGCCTGTATTCCCTGTTTGGATCGAAAGATAA TCTGGTTGTCGCCTACCTGCAGGAACTGGATGAGAAGTGGCGCGCCGATTGGCATGCGCTGGCGGATCAACGCGAAAAGC CAGAGGATCGCATCATCGCGTTCTTTGACCTGTGCATTCAGCAGGAACCAGACAACAACTTCCGTGGATCTCACTTCCAG AATGCGGCCAGCGAGTACCCGCGCCCCGAAACCGATTCGGAGCAGCGCATTCGCGACGCGGCGATGGAGTATCGCCGCTG GTGTCGCGACACGATGGCAGAGTTGTTAACCGAACGTTTTGGCTATGCCTCGCAGACACTGGCAGACCAGCTGATGGTGT TCATGGACGGTGGGCTTAACGGAGCGAAAATGTCCCGCAACACCGTGCCGTTGGAAACCGCGCGCGGCCTGGCGAAGCAG CTGCTGCTGACGGCTCCGATGAGCTACAACATCTAA
Upstream 100 bases:
>100_bases CCTGTAGAGTCCAAAGGGCTCTACAGGATTTTGTAGACTTGAGCGAGTAATCGCGCCACAAGCCGAATAACAAGGATGAC AGGACTAAGGAGAAAAGTAG
Downstream 100 bases:
>100_bases CTATTCCGCTTGGCCTTCCGCGCGAGCTTCTTCTCCTTCTTTCGCTCAACCAGCTGGTTCTTCATCAGCTTGTGGTGCTC CAGGAATTCATCTGAGTAGG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Protein; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator Protein TetR Family; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Repressor
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MATAEDKPRTAGSAASTNSSAKAAAKTSGAKTAKKVAKKTAKKTGKATKQTARSSRRNRPGPRQRLLASATNLFTTQGIR VIGIDRILRDADVAKASLYSLFGSKDNLVVAYLQELDEKWRADWHALADQREKPEDRIIAFFDLCIQQEPDNNFRGSHFQ NAASEYPRPETDSEQRIRDAAMEYRRWCRDTMAELLTERFGYASQTLADQLMVFMDGGLNGAKMSRNTVPLETARGLAKQ LLLTAPMSYNI
Sequences:
>Translated_251_residues MATAEDKPRTAGSAASTNSSAKAAAKTSGAKTAKKVAKKTAKKTGKATKQTARSSRRNRPGPRQRLLASATNLFTTQGIR VIGIDRILRDADVAKASLYSLFGSKDNLVVAYLQELDEKWRADWHALADQREKPEDRIIAFFDLCIQQEPDNNFRGSHFQ NAASEYPRPETDSEQRIRDAAMEYRRWCRDTMAELLTERFGYASQTLADQLMVFMDGGLNGAKMSRNTVPLETARGLAKQ LLLTAPMSYNI >Mature_250_residues ATAEDKPRTAGSAASTNSSAKAAAKTSGAKTAKKVAKKTAKKTGKATKQTARSSRRNRPGPRQRLLASATNLFTTQGIRV IGIDRILRDADVAKASLYSLFGSKDNLVVAYLQELDEKWRADWHALADQREKPEDRIIAFFDLCIQQEPDNNFRGSHFQN AASEYPRPETDSEQRIRDAAMEYRRWCRDTMAELLTERFGYASQTLADQLMVFMDGGLNGAKMSRNTVPLETARGLAKQL LLTAPMSYNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27895; Mature: 27764
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAEDKPRTAGSAASTNSSAKAAAKTSGAKTAKKVAKKTAKKTGKATKQTARSSRRNRP CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPRQRLLASATNLFTTQGIRVIGIDRILRDADVAKASLYSLFGSKDNLVVAYLQELDEKW CHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RADWHALADQREKPEDRIIAFFDLCIQQEPDNNFRGSHFQNAASEYPRPETDSEQRIRDA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH AMEYRRWCRDTMAELLTERFGYASQTLADQLMVFMDGGLNGAKMSRNTVPLETARGLAKQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH LLLTAPMSYNI HHHHCCCCCCC >Mature Secondary Structure ATAEDKPRTAGSAASTNSSAKAAAKTSGAKTAKKVAKKTAKKTGKATKQTARSSRRNRP CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPRQRLLASATNLFTTQGIRVIGIDRILRDADVAKASLYSLFGSKDNLVVAYLQELDEKW CHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RADWHALADQREKPEDRIIAFFDLCIQQEPDNNFRGSHFQNAASEYPRPETDSEQRIRDA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH AMEYRRWCRDTMAELLTERFGYASQTLADQLMVFMDGGLNGAKMSRNTVPLETARGLAKQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH LLLTAPMSYNI HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA