| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761172
Identifier: 77761172
GI number: 77761172
Start: 2247935
End: 2248810
Strand: Direct
Name: 77761172
Synonym: XC_1852
Alternate gene names: NA
Gene position: 2247935-2248810 (Clockwise)
Preceding gene: 66768172
Following gene: 66768174
Centisome position: 43.66
GC content: 64.5
Gene sequence:
>876_bases ATGCGCGTGCACCACCTCAACTGCATCTCCACCTGCCCGCTGGGCGGCCACCTGATGGATGGACGCACGCATGGCGTGCT TGAGCGCGGCCACCTGAGCTGCCATTGCCTGTTGGTGGAAACCAATGCCGGTCTGGTCCTGATTGACACCGGCTTCGGGC TGCGGGATGTCGCCGAGCCACGTGCGCGGCTAAGCGCGTTCTTTCTGGCGTTGGTGAAACCGGACCTGCGCGAAGACATG ACGGCGATCCGGCAGATCCAGCGCTTGGGTTTCGACCCGCGCGATGTGCGGCATATCGTGCTCACCCATCTGGATTTCGA CCATGCTGGCGGGCTGGATGATTTTCCGCATGCGCGCGTGCATCTGATGACGCGTGAGCGTGATGCCGCGCTGGCGCAGC ACACCTGGATGGACCGGCAACGCTTTCGCCCGCAGCAATGGTCCACACGGGGGCAATGGCGCACCTATGACAGCACCGCC GGCGCGGCCTGGATGGGCCTGGAGTGCGTCCACGACCTACAAGGGCTACCGCCAGAGATCCTGCTGGTGCCGCTGCCCGG CCACACCTTCGGGCATGCCGCTGTTGCGGTGCGCACCCCTGAGCGTTGGCTGCTGCTCGCCGGCGATGCGTATTTCTATC ACCGCGAAATGGACCCGCAACCCTACTGCACGCCCGGGCTGCGTTTCTATCAATGGATGCTGGAAAAGGACCGCACTGCA AGGCTGCATAACCAGCAACGGTTGCGCGCACTGCGGCAACAGCACGGTGCGGAGGTGGAGGTGTTTTGTTCGCACGATGT CGTGGAATTCGAACGCGTTGCCGGGCTGCCCGCACGCTTGCCTGCAGGCGCGTTGCAACACGCGCCCACGGCGTGA
Upstream 100 bases:
>100_bases CGTCAAAGCAGTGTGTGCGTGGCGGCCGTCGTCGCTGCATCGCTCACCGATGAGCGACGACGTCCTTGCAATGCTGGCCC GCCAAGCGCGGAGCGTGCCG
Downstream 100 bases:
>100_bases GCACGTGTGCTTCACTTCGCCAGAACGTGCCGCAGCGCGATCATGCGCCACCAGTGCCGCAGCAGCGAGGCGGTGCGCTA CAGGAGAAGCACGATGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRVHHLNCISTCPLGGHLMDGRTHGVLERGHLSCHCLLVETNAGLVLIDTGFGLRDVAEPRARLSAFFLALVKPDLREDM TAIRQIQRLGFDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTRERDAALAQHTWMDRQRFRPQQWSTRGQWRTYDSTA GAAWMGLECVHDLQGLPPEILLVPLPGHTFGHAAVAVRTPERWLLLAGDAYFYHREMDPQPYCTPGLRFYQWMLEKDRTA RLHNQQRLRALRQQHGAEVEVFCSHDVVEFERVAGLPARLPAGALQHAPTA
Sequences:
>Translated_291_residues MRVHHLNCISTCPLGGHLMDGRTHGVLERGHLSCHCLLVETNAGLVLIDTGFGLRDVAEPRARLSAFFLALVKPDLREDM TAIRQIQRLGFDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTRERDAALAQHTWMDRQRFRPQQWSTRGQWRTYDSTA GAAWMGLECVHDLQGLPPEILLVPLPGHTFGHAAVAVRTPERWLLLAGDAYFYHREMDPQPYCTPGLRFYQWMLEKDRTA RLHNQQRLRALRQQHGAEVEVFCSHDVVEFERVAGLPARLPAGALQHAPTA >Mature_291_residues MRVHHLNCISTCPLGGHLMDGRTHGVLERGHLSCHCLLVETNAGLVLIDTGFGLRDVAEPRARLSAFFLALVKPDLREDM TAIRQIQRLGFDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTRERDAALAQHTWMDRQRFRPQQWSTRGQWRTYDSTA GAAWMGLECVHDLQGLPPEILLVPLPGHTFGHAAVAVRTPERWLLLAGDAYFYHREMDPQPYCTPGLRFYQWMLEKDRTA RLHNQQRLRALRQQHGAEVEVFCSHDVVEFERVAGLPARLPAGALQHAPTA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33119; Mature: 33119
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHHLNCISTCPLGGHLMDGRTHGVLERGHLSCHCLLVETNAGLVLIDTGFGLRDVAEP CEEEECCHHEECCCCCEEECCCCCCCEECCCCEEEEEEEECCCCEEEEECCCCCHHHHHH RARLSAFFLALVKPDLREDMTAIRQIQRLGFDPRDVRHIVLTHLDFDHAGGLDDFPHARV HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCCEE HLMTRERDAALAQHTWMDRQRFRPQQWSTRGQWRTYDSTAGAAWMGLECVHDLQGLPPEI EEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE LLVPLPGHTFGHAAVAVRTPERWLLLAGDAYFYHREMDPQPYCTPGLRFYQWMLEKDRTA EEEECCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHH RLHNQQRLRALRQQHGAEVEVFCSHDVVEFERVAGLPARLPAGALQHAPTA HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHCCCCCC >Mature Secondary Structure MRVHHLNCISTCPLGGHLMDGRTHGVLERGHLSCHCLLVETNAGLVLIDTGFGLRDVAEP CEEEECCHHEECCCCCEEECCCCCCCEECCCCEEEEEEEECCCCEEEEECCCCCHHHHHH RARLSAFFLALVKPDLREDMTAIRQIQRLGFDPRDVRHIVLTHLDFDHAGGLDDFPHARV HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCCEE HLMTRERDAALAQHTWMDRQRFRPQQWSTRGQWRTYDSTAGAAWMGLECVHDLQGLPPEI EEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE LLVPLPGHTFGHAAVAVRTPERWLLLAGDAYFYHREMDPQPYCTPGLRFYQWMLEKDRTA EEEECCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHH RLHNQQRLRALRQQHGAEVEVFCSHDVVEFERVAGLPARLPAGALQHAPTA HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]