| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is fabH [H]
Identifier: 77761158
GI number: 77761158
Start: 2009709
End: 2010707
Strand: Direct
Name: fabH [H]
Synonym: XC_1672
Alternate gene names: 77761158
Gene position: 2009709-2010707 (Clockwise)
Preceding gene: 66767995
Following gene: 66767997
Centisome position: 39.03
GC content: 69.37
Gene sequence:
>999_bases TTGAACGCATTGCCGCTGCGCATCCTGGGCACCGGGTGCCACGTTCCCGCCACGGAAGTGACGTCGCAAGAACTGGACGC ACGCTGGCAGTTGCCGCCGGGAACCACGTTCGCGCGGCTGGGCGTCGCCACGCGCCACTATGCAGGCGAGGGCGAAACGG CCTCGTCCATGGGCGCCGCCGCCGCGCAAGCGGCATTGGTCAGCGCCGGTATCGATAGCGGCGAGATCGACTGCCTGATC TCCGCCTGCAGCGTGATGGAGCAGCCGATCCCGTGCCAGGCAGTGCTGATCCAGCGTGCCCTGGGGCTGGGTGACTCTGG CATCCCGGCATTCGATGTCAACGCCACCTGCCTGAGTTTTCTGGTCGCATTGGACATGGCCACAAACGCGCTGGCCCTGG GCCGCTATCGCCGCGTGCTCATCGTCTCCAGCGAAGTGGCGTCGGGCGGGCTGGATGCGGCGGTGCCATCGACCGCCGGC TTGTTCGGCGATGGCGCTGCCGCCGTGGTGGTCGGGCGCAGCGCGCCTGACGAAGACTCGGCGCTGCTGTCCAGCCGCCT GGCCAGCTACGGCAGCGGTGCCGAGCTGTGCCGCATCCGCGGTGGCGGCAGCCGCTATCCGCGTGGCGAAGACAGCACGC CCGAAGCCACGCGGGTCTTCACCATGGATGGGCGCGGTGCGTATCGCTTTGCGGCGCGCCACCTGCCGGCGTTCTGGGAC CAGCTGCTGCGCGACGCCGGTACCGAGACCACCGCACTGCGCTGCCTGATCCCGCATCAAGCCTCCGGTGGCGGCCTGGA TCATGTGGTGCAGGCGCTCGGCCTGCGCCCGGAGCAGGTGGTGCGCATCCTGCACGCGCATGGCAACCAGGTGGCGGCAT CGCTGCCACACGCGCTGCATCAGGCCAGGGTCACGCAGCAGCTGCAGCGCGGCGAACTATTCGCGATGCTCGGCACCGGT GCCGGCCTGTCGATCGGCGGCATGGTGTTGAGGTACTGA
Upstream 100 bases:
>100_bases CGCCGTGCAAGCCCCACGACTGCGCCAACATTGCGCAGGCAGCTGGGTCTGCCTGGCCGGCCACGGTATGCTGCGCGCCT TCACCAACGAGGCGGATCTG
Downstream 100 bases:
>100_bases TGGCGACGCGGGTCTCGGTCGAGTTGTTGCGCATCGGGCATTGCCACCACTGCGAACGCATGGTGCGCGCGGACGGGCAT TGGCATTCAGTGGAATTCCC
Product: GumO
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNALPLRILGTGCHVPATEVTSQELDARWQLPPGTTFARLGVATRHYAGEGETASSMGAAAAQAALVSAGIDSGEIDCLI SACSVMEQPIPCQAVLIQRALGLGDSGIPAFDVNATCLSFLVALDMATNALALGRYRRVLIVSSEVASGGLDAAVPSTAG LFGDGAAAVVVGRSAPDEDSALLSSRLASYGSGAELCRIRGGGSRYPRGEDSTPEATRVFTMDGRGAYRFAARHLPAFWD QLLRDAGTETTALRCLIPHQASGGGLDHVVQALGLRPEQVVRILHAHGNQVAASLPHALHQARVTQQLQRGELFAMLGTG AGLSIGGMVLRY
Sequences:
>Translated_332_residues MNALPLRILGTGCHVPATEVTSQELDARWQLPPGTTFARLGVATRHYAGEGETASSMGAAAAQAALVSAGIDSGEIDCLI SACSVMEQPIPCQAVLIQRALGLGDSGIPAFDVNATCLSFLVALDMATNALALGRYRRVLIVSSEVASGGLDAAVPSTAG LFGDGAAAVVVGRSAPDEDSALLSSRLASYGSGAELCRIRGGGSRYPRGEDSTPEATRVFTMDGRGAYRFAARHLPAFWD QLLRDAGTETTALRCLIPHQASGGGLDHVVQALGLRPEQVVRILHAHGNQVAASLPHALHQARVTQQLQRGELFAMLGTG AGLSIGGMVLRY >Mature_332_residues MNALPLRILGTGCHVPATEVTSQELDARWQLPPGTTFARLGVATRHYAGEGETASSMGAAAAQAALVSAGIDSGEIDCLI SACSVMEQPIPCQAVLIQRALGLGDSGIPAFDVNATCLSFLVALDMATNALALGRYRRVLIVSSEVASGGLDAAVPSTAG LFGDGAAAVVVGRSAPDEDSALLSSRLASYGSGAELCRIRGGGSRYPRGEDSTPEATRVFTMDGRGAYRFAARHLPAFWD QLLRDAGTETTALRCLIPHQASGGGLDHVVQALGLRPEQVVRILHAHGNQVAASLPHALHQARVTQQLQRGELFAMLGTG AGLSIGGMVLRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=326, Percent_Identity=31.2883435582822, Blast_Score=145, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 34436; Mature: 34436
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALPLRILGTGCHVPATEVTSQELDARWQLPPGTTFARLGVATRHYAGEGETASSMGAA CCCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCHHHHHCCHHHHCCCCCCCHHHHHHH AAQAALVSAGIDSGEIDCLISACSVMEQPIPCQAVLIQRALGLGDSGIPAFDVNATCLSF HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCHHHHHH LVALDMATNALALGRYRRVLIVSSEVASGGLDAAVPSTAGLFGDGAAAVVVGRSAPDEDS HHHHHHHHHHHHHHCCEEEEEEECHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHH ALLSSRLASYGSGAELCRIRGGGSRYPRGEDSTPEATRVFTMDGRGAYRFAARHLPAFWD HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCHHHHH QLLRDAGTETTALRCLIPHQASGGGLDHVVQALGLRPEQVVRILHAHGNQVAASLPHALH HHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH QARVTQQLQRGELFAMLGTGAGLSIGGMVLRY HHHHHHHHHCCCEEEEEECCCCCCCCCEEECC >Mature Secondary Structure MNALPLRILGTGCHVPATEVTSQELDARWQLPPGTTFARLGVATRHYAGEGETASSMGAA CCCCCEEEEECCCCCCHHHHHHHHHCCEEECCCCCHHHHHCCHHHHCCCCCCCHHHHHHH AAQAALVSAGIDSGEIDCLISACSVMEQPIPCQAVLIQRALGLGDSGIPAFDVNATCLSF HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCHHHHHH LVALDMATNALALGRYRRVLIVSSEVASGGLDAAVPSTAGLFGDGAAAVVVGRSAPDEDS HHHHHHHHHHHHHHCCEEEEEEECHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHH ALLSSRLASYGSGAELCRIRGGGSRYPRGEDSTPEATRVFTMDGRGAYRFAARHLPAFWD HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCHHHHH QLLRDAGTETTALRCLIPHQASGGGLDHVVQALGLRPEQVVRILHAHGNQVAASLPHALH HHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH QARVTQQLQRGELFAMLGTGAGLSIGGMVLRY HHHHHHHHHCCCEEEEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA