| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ggpS [H]
Identifier: 77761135
GI number: 77761135
Start: 1363607
End: 1365901
Strand: Reverse
Name: ggpS [H]
Synonym: XC_1123
Alternate gene names: 77761135
Gene position: 1365901-1363607 (Counterclockwise)
Preceding gene: 66767452
Following gene: 66767450
Centisome position: 26.53
GC content: 67.19
Gene sequence:
>2295_bases GTGATCCTGGCCACCGACCTGGATGGCACCTTCCTGGCCGGCTCTGCAGAACACCGTCACCAGCTGTATCGCCTGGTCGA CCAGCATCCCGAAATCCGCCTGATCTTCATTACCGGGCGCGGACTCGAAGCGGTGATGCCCTTGCTCACCGACCCCACCA TTCCCCGGCCCGACTATGTGGTGTGCGACGTGGGTGCCACCGTGGTGGACGGCCACACGCTGCAACCGTTGCAGCCCCTG CAATCGATGATCGACGCGCACTGGCCCGGCGAGCAGGTGGTGGCGCAGGCGATGCGCGCATTCCCGCAATTGCAGCGCCA GGACATGCCGCAGGAGCGCCGCTGCTCGTATTTCTGCGATCCGCACACGCTGGCGCCGCTGCGTGCGCAGATCGAGCAGA CCGCGCGCGCGCTTGGTTGCGACGTGCTGTATTCGGCCGACCGCTATCTGGACATTCTGCCGCCCGATACCGACAAGGGC CGCACCCTGGGCGCGTTGGCACGCCAGCTGGAGCTGCCGCGCGAGCGCATCCTGGTGGCCGGCGACACGCTCAACGATCT CTCCATGTATCTGGCCGGTTTCCGCGGCGTCTGCGTGGGCGATTCGGAAGCGGCCTTGACGCAGGCCACTGCGCAGTTGG ATGCGACCTATCACGCCAGTGCGCCCGGGTGCGGCGGCATCCTGGAGGCGATTGCGCACTTCGGCCTGCTTGCCGACGAC GACCCGCACGTGCCGGCGGTGCAGGCCCCGCGCAAGGGCGGCGCCGAGCTGGTGATGGTCTATCACCGCCTGCCGTATGA CGAAGTGGTCGAGCACGGCGAGCTGGTGCGCCGCGCGCCGCGCTCGCCCAACGGCATCATTCCCTCGCTGCTGAGCTTCT TCGAAGGTGGCCAGCGCGGCTCGTGGGTGGCCTGGAGCGTGGACGACCCCAAGCGCGGGCCGTTCCAGACCCACACCGAG GTGGATGCGCAGCGCTACCCGACGCTCACCGCCGCACGCGTGCCGCTGAGCAAGAGCGAGGTGGACATCTTCTACAAGCG GTTTTCCAAGGAAGCGTTCTGGCCGATGCTGCATGTGTTCTGGGAACGCGCGCGCTTCCGCGAGGACGACTGGCAGGTAT TTCTTGCAGTCAACCGCAAGTTTGCACAGGCCACCTCGGCCGAGGCCGCGCACGGCGCCACGGTCTGGATCCATGACTAC AACCTGTGGATGGTGCCGGCGTACCTGCGCGAGCTGCGCCCGGATCTGAAGATCGCGTTCTTCCATCACACCTACTTCCC CTCGGCTGACGTGTTCAATGTGGTGCCATGGCGCCGCGAGATCATCGGTAGCCTGATGTGCTGCGATTACGTGGGCTTCC ATATCCCGCGCCAGGTGGAGAACTTCGTGGACGTGGTGCGCGGCGTGATGCCGGTGGAACGACTGGCGCAGGAAAGCTGC GCGCCACGGTTTCTCACCTATGGCTGCGCGGTGGGCCTGGACACCATGACCACCTGCCTGCGTGTTGCCGATCGCGACGT GGCGCTGGGCGCGCATCCGGTGGGCACCGACCTGCGCCGCATTCGCGCCGCGCTGAGCAAGCCGGACGTGCGCAACGACA TCTTCAAGCTGCGCCGCGAGATCGGTGCGCGCAAGCTGGTGTTGTCGGTGGAGCGGCTGGATTACACCAAGGGCACGCTG GCGAAACTGGAGGCGTTCGAGCGCCTGCTCGACAGCCAGCGGCAGCTGCTGGGCAAGGTCACCTTGCTGATGGTGTGCGT GCCGGCGGCGCGCGAGATGACCATCTACCGCACCTTGCAGACGCAGATCGAACAGGCGGTGGGCCGCATCAACGGGCGGT TCTCGCGGCTGGACTGGACGCCGGTGCGCTTCTTCGCACAGGCCCTGCCGTTCGAGCAGGTGGTGGCGCATTACGCCGCC GCGCAGGTGATGTGGATCACGCCGCTGCGCGATGGCTTGAATCTGGTGGCCAAGGAGTTCGTGGCGGTGCAAGGCATCGA AGGCGGCAGCGGCGTGCTGGTGCTGAGCGAATTTGCCGGCGCGGCTGCAGAACTCAAAGGCGCGGTACTGACCAACCCGC ACGACCCGGCCGATCTGGCGGCCGGCCTGTTGCAGGCACTGGCGATGCCCGATGACGAGGCGGCCGGGCGCCTGCGGCAG CTGTACGACAGCGTGGAGTACTACAACATCGACCACTGGGGGCGCGACTTCCTGGACGCGGTGGCACGTAGCCGTGGCGC GCATGCCCGTGTGCCCTTGGCGGCGGCCAGCACGGTGGCCGAGCCGGTCGCCTAG
Upstream 100 bases:
>100_bases AAACCGATTCACCCTCCCCTCCTCACAAGGAAACACATTGACTGATCAAACCAGACTCCCGAACACCTCATCCCTGACCC ACCCCCGCCCGGATCCTGCC
Downstream 100 bases:
>100_bases GCACGCGCCGACGAGCGCGCTGCAACACGCACAGTCACACAGCAACGCCCGGGCTCTCCGGGCGTTGCTGTGTGGAGACA AGCGTGACGCTGGCCCATCG
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Glucosyl-glycerol-phosphate synthase; GG-phosphate synthase; GGPS [H]
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MILATDLDGTFLAGSAEHRHQLYRLVDQHPEIRLIFITGRGLEAVMPLLTDPTIPRPDYVVCDVGATVVDGHTLQPLQPL QSMIDAHWPGEQVVAQAMRAFPQLQRQDMPQERRCSYFCDPHTLAPLRAQIEQTARALGCDVLYSADRYLDILPPDTDKG RTLGALARQLELPRERILVAGDTLNDLSMYLAGFRGVCVGDSEAALTQATAQLDATYHASAPGCGGILEAIAHFGLLADD DPHVPAVQAPRKGGAELVMVYHRLPYDEVVEHGELVRRAPRSPNGIIPSLLSFFEGGQRGSWVAWSVDDPKRGPFQTHTE VDAQRYPTLTAARVPLSKSEVDIFYKRFSKEAFWPMLHVFWERARFREDDWQVFLAVNRKFAQATSAEAAHGATVWIHDY NLWMVPAYLRELRPDLKIAFFHHTYFPSADVFNVVPWRREIIGSLMCCDYVGFHIPRQVENFVDVVRGVMPVERLAQESC APRFLTYGCAVGLDTMTTCLRVADRDVALGAHPVGTDLRRIRAALSKPDVRNDIFKLRREIGARKLVLSVERLDYTKGTL AKLEAFERLLDSQRQLLGKVTLLMVCVPAAREMTIYRTLQTQIEQAVGRINGRFSRLDWTPVRFFAQALPFEQVVAHYAA AQVMWITPLRDGLNLVAKEFVAVQGIEGGSGVLVLSEFAGAAAELKGAVLTNPHDPADLAAGLLQALAMPDDEAAGRLRQ LYDSVEYYNIDHWGRDFLDAVARSRGAHARVPLAAASTVAEPVA
Sequences:
>Translated_764_residues MILATDLDGTFLAGSAEHRHQLYRLVDQHPEIRLIFITGRGLEAVMPLLTDPTIPRPDYVVCDVGATVVDGHTLQPLQPL QSMIDAHWPGEQVVAQAMRAFPQLQRQDMPQERRCSYFCDPHTLAPLRAQIEQTARALGCDVLYSADRYLDILPPDTDKG RTLGALARQLELPRERILVAGDTLNDLSMYLAGFRGVCVGDSEAALTQATAQLDATYHASAPGCGGILEAIAHFGLLADD DPHVPAVQAPRKGGAELVMVYHRLPYDEVVEHGELVRRAPRSPNGIIPSLLSFFEGGQRGSWVAWSVDDPKRGPFQTHTE VDAQRYPTLTAARVPLSKSEVDIFYKRFSKEAFWPMLHVFWERARFREDDWQVFLAVNRKFAQATSAEAAHGATVWIHDY NLWMVPAYLRELRPDLKIAFFHHTYFPSADVFNVVPWRREIIGSLMCCDYVGFHIPRQVENFVDVVRGVMPVERLAQESC APRFLTYGCAVGLDTMTTCLRVADRDVALGAHPVGTDLRRIRAALSKPDVRNDIFKLRREIGARKLVLSVERLDYTKGTL AKLEAFERLLDSQRQLLGKVTLLMVCVPAAREMTIYRTLQTQIEQAVGRINGRFSRLDWTPVRFFAQALPFEQVVAHYAA AQVMWITPLRDGLNLVAKEFVAVQGIEGGSGVLVLSEFAGAAAELKGAVLTNPHDPADLAAGLLQALAMPDDEAAGRLRQ LYDSVEYYNIDHWGRDFLDAVARSRGAHARVPLAAASTVAEPVA >Mature_764_residues MILATDLDGTFLAGSAEHRHQLYRLVDQHPEIRLIFITGRGLEAVMPLLTDPTIPRPDYVVCDVGATVVDGHTLQPLQPL QSMIDAHWPGEQVVAQAMRAFPQLQRQDMPQERRCSYFCDPHTLAPLRAQIEQTARALGCDVLYSADRYLDILPPDTDKG RTLGALARQLELPRERILVAGDTLNDLSMYLAGFRGVCVGDSEAALTQATAQLDATYHASAPGCGGILEAIAHFGLLADD DPHVPAVQAPRKGGAELVMVYHRLPYDEVVEHGELVRRAPRSPNGIIPSLLSFFEGGQRGSWVAWSVDDPKRGPFQTHTE VDAQRYPTLTAARVPLSKSEVDIFYKRFSKEAFWPMLHVFWERARFREDDWQVFLAVNRKFAQATSAEAAHGATVWIHDY NLWMVPAYLRELRPDLKIAFFHHTYFPSADVFNVVPWRREIIGSLMCCDYVGFHIPRQVENFVDVVRGVMPVERLAQESC APRFLTYGCAVGLDTMTTCLRVADRDVALGAHPVGTDLRRIRAALSKPDVRNDIFKLRREIGARKLVLSVERLDYTKGTL AKLEAFERLLDSQRQLLGKVTLLMVCVPAAREMTIYRTLQTQIEQAVGRINGRFSRLDWTPVRFFAQALPFEQVVAHYAA AQVMWITPLRDGLNLVAKEFVAVQGIEGGSGVLVLSEFAGAAAELKGAVLTNPHDPADLAAGLLQALAMPDDEAAGRLRQ LYDSVEYYNIDHWGRDFLDAVARSRGAHARVPLAAASTVAEPVA
Specific function: Involved in salt tolerance by producing GG-phosphate from ADP-glucose and glycerol-3-phosphate (G3P), an intermediate in the synthesis of the osmolyte glucosylglycerol (GG) [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=471, Percent_Identity=30.7855626326964, Blast_Score=204, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115533560, Length=371, Percent_Identity=27.4932614555256, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI115533558, Length=371, Percent_Identity=27.4932614555256, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71987012, Length=445, Percent_Identity=26.0674157303371, Blast_Score=133, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6319602, Length=496, Percent_Identity=29.4354838709677, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6323537, Length=403, Percent_Identity=27.5434243176179, Blast_Score=173, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323917, Length=399, Percent_Identity=28.3208020050125, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320279, Length=433, Percent_Identity=23.7875288683603, Blast_Score=144, Evalue=4e-35, Organism=Drosophila melanogaster, GI19920676, Length=511, Percent_Identity=33.4637964774951, Blast_Score=250, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012764 - InterPro: IPR001830 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR006380 [H]
Pfam domain/function: PF00982 Glyco_transf_20; PF05116 S6PP [H]
EC number: =2.4.1.213 [H]
Molecular weight: Translated: 85050; Mature: 85050
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILATDLDGTFLAGSAEHRHQLYRLVDQHPEIRLIFITGRGLEAVMPLLTDPTIPRPDYV CEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEE VCDVGATVVDGHTLQPLQPLQSMIDAHWPGEQVVAQAMRAFPQLQRQDMPQERRCSYFCD EEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC PHTLAPLRAQIEQTARALGCDVLYSADRYLDILPPDTDKGRTLGALARQLELPRERILVA CCCCHHHHHHHHHHHHHHCCHHEECCCCEEECCCCCCCCCCHHHHHHHHHHCCHHHEEEE GDTLNDLSMYLAGFRGVCVGDSEAALTQATAQLDATYHASAPGCGGILEAIAHFGLLADD CCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCC DPHVPAVQAPRKGGAELVMVYHRLPYDEVVEHGELVRRAPRSPNGIIPSLLSFFEGGQRG CCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC SWVAWSVDDPKRGPFQTHTEVDAQRYPTLTAARVPLSKSEVDIFYKRFSKEAFWPMLHVF CEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH WERARFREDDWQVFLAVNRKFAQATSAEAAHGATVWIHDYNLWMVPAYLRELRPDLKIAF HHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCEEEEEECCEEEHHHHHHHCCCCCEEEE FHHTYFPSADVFNVVPWRREIIGSLMCCDYVGFHIPRQVENFVDVVRGVMPVERLAQESC EEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC APRFLTYGCAVGLDTMTTCLRVADRDVALGAHPVGTDLRRIRAALSKPDVRNDIFKLRRE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH IGARKLVLSVERLDYTKGTLAKLEAFERLLDSQRQLLGKVTLLMVCVPAAREMTIYRTLQ HCHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQIEQAVGRINGRFSRLDWTPVRFFAQALPFEQVVAHYAAAQVMWITPLRDGLNLVAKEF HHHHHHHHHHCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH VAVQGIEGGSGVLVLSEFAGAAAELKGAVLTNPHDPADLAAGLLQALAMPDDEAAGRLRQ HHHCCCCCCCCEEEEEHHCCHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LYDSVEYYNIDHWGRDFLDAVARSRGAHARVPLAAASTVAEPVA HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MILATDLDGTFLAGSAEHRHQLYRLVDQHPEIRLIFITGRGLEAVMPLLTDPTIPRPDYV CEEEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEE VCDVGATVVDGHTLQPLQPLQSMIDAHWPGEQVVAQAMRAFPQLQRQDMPQERRCSYFCD EEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC PHTLAPLRAQIEQTARALGCDVLYSADRYLDILPPDTDKGRTLGALARQLELPRERILVA CCCCHHHHHHHHHHHHHHCCHHEECCCCEEECCCCCCCCCCHHHHHHHHHHCCHHHEEEE GDTLNDLSMYLAGFRGVCVGDSEAALTQATAQLDATYHASAPGCGGILEAIAHFGLLADD CCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCC DPHVPAVQAPRKGGAELVMVYHRLPYDEVVEHGELVRRAPRSPNGIIPSLLSFFEGGQRG CCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC SWVAWSVDDPKRGPFQTHTEVDAQRYPTLTAARVPLSKSEVDIFYKRFSKEAFWPMLHVF CEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH WERARFREDDWQVFLAVNRKFAQATSAEAAHGATVWIHDYNLWMVPAYLRELRPDLKIAF HHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCEEEEEECCEEEHHHHHHHCCCCCEEEE FHHTYFPSADVFNVVPWRREIIGSLMCCDYVGFHIPRQVENFVDVVRGVMPVERLAQESC EEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC APRFLTYGCAVGLDTMTTCLRVADRDVALGAHPVGTDLRRIRAALSKPDVRNDIFKLRRE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH IGARKLVLSVERLDYTKGTLAKLEAFERLLDSQRQLLGKVTLLMVCVPAAREMTIYRTLQ HCHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQIEQAVGRINGRFSRLDWTPVRFFAQALPFEQVVAHYAAAQVMWITPLRDGLNLVAKEF HHHHHHHHHHCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH VAVQGIEGGSGVLVLSEFAGAAAELKGAVLTNPHDPADLAAGLLQALAMPDDEAAGRLRQ HHHCCCCCCCCEEEEEHHCCHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LYDSVEYYNIDHWGRDFLDAVARSRGAHARVPLAAASTVAEPVA HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA