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The map label for this gene is sdhC [H]

Identifier: 66768302

GI number: 66768302

Start: 2393933

End: 2394328

Strand: Direct

Name: sdhC [H]

Synonym: XC_1981

Alternate gene names: 66768302

Gene position: 2393933-2394328 (Clockwise)

Preceding gene: 66768301

Following gene: 66768303

Centisome position: 46.5

GC content: 61.11

Gene sequence:

>396_bases
ATGGCGACCCGCGAACGTCCACTTTCCCCGCATCTTCAGGTGTATCGCTGGCAGATACAGATGGTGACCTCGATCCTGAA
TCGAGCCACCGGCATTGTTCTGTCCATCGGCGCCCTTGTGATTGCCGCCGCCTTGCTGACCCTCATGCTTGGCCCCGACC
ACTGGAATTGCTTCCGCGACATGGCGGCAGCCTGGTATGGACAGGTGTTCCTGTTCGGCTGGACCTGGTGCTTTGCCTTC
CACCTGTTTGGTGGCCTGCGCCACATCCTGCAGGACTTCGGCCAGGGCTATGCCGTGCGCTCGTTCGTCAGCATCGGCTG
GTTGTCGGTGATTTTGAGCTTCGTGCTGACCGCCGCCATCTGGGCGTACGTGCTGCTGTCCGGAGGTGCCGTATGA

Upstream 100 bases:

>100_bases
GCTACGGCGACTGGGAAAAAAATGGACGCTGCATCGATTTTTGAGCAGCTTTTAGCCACAGCGGCCTAGTGCCGCCCAGC
CGAGAAAACGAGCCCAGCGA

Downstream 100 bases:

>100_bases
GCCGCTATAGAACCCCGTTGAAGAACGTGCGCGGCCTGGGCGCCGCCAAGACCGGCACCGAGCATTTCGTGGTGCAGCGT
CTGACCGCCACCGCGCTGGT

Product: succinate dehydrogenase membrane anchor subunit

Products: fumarate; reduced acceptor

Alternate protein names: Cytochrome b-556 [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRDMAAAWYGQVFLFGWTWCFAF
HLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAIWAYVLLSGGAV

Sequences:

>Translated_131_residues
MATRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRDMAAAWYGQVFLFGWTWCFAF
HLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAIWAYVLLSGGAV
>Mature_130_residues
ATRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRDMAAAWYGQVFLFGWTWCFAFH
LFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAIWAYVLLSGGAV

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b560 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018495
- InterPro:   IPR014314
- InterPro:   IPR014361
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14634; Mature: 14503

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MAAAWYGQVFLFGWTWCFAFHLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WAYVLLSGGAV
HHHHHHCCCCC
>Mature Secondary Structure 
ATRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MAAAWYGQVFLFGWTWCFAFHLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WAYVLLSGGAV
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA