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The map label for this gene is yxjL [H]

Identifier: 66768259

GI number: 66768259

Start: 2339753

End: 2340394

Strand: Reverse

Name: yxjL [H]

Synonym: XC_1938

Alternate gene names: 66768259

Gene position: 2340394-2339753 (Counterclockwise)

Preceding gene: 66768260

Following gene: 77761177

Centisome position: 45.46

GC content: 66.51

Gene sequence:

>642_bases
ATGGCTGATACGACACGACCGACCGCGGTGCTGGTGGTGGACGATCACCCGTTGTTGCGTGACGGATTGAGCGCCATGCT
GGGCGCCGAGCGCGACATGCAGGTGGTGGGCGAAGCCGAAGATGGCGAACAGGCCGTGGACTACTACACCCGCCTGCGCC
CGGACGTGGTGCTGATGGATCTGCAGATGCCACGCGTGGACGGCGTGCAGGCGATCCAGCGCATCCGCCAGCTCGACCCC
ATGGCCAAGGTCATCGTCCTGACCACCTACACCGGCGATGTGCGTGCAGTACGCGCCTTGCAGGCCGGCGCTTGCGGGTA
TCTGCTCAAGAGCGCGTTGCGGCGCGAACTGGTCGACACCATCCGCGACGTGCGCCGCGGTCAACGCCGCCACGTGCCCG
CCTCGGTGGCCGAGAACATCGCCGCGCACGTGCTCGACGACGCCTTGTCCGCACGCGAGACCGAGGTGCTGAACCTGGTC
GCCACCGGCTGCTCCAACAAGCAGATCGGCAACGCACTGGGCATCTCAGAAGAAACCGTCAAGGCGCACATGAAGAACAT
CCTGTGCAAGCTCGGCGTGCGCGACCGCACCCACGCGGTCACCGTTGCGCTGCGTCGCGGGATCCTGTCGCTGGAGACCT
GA

Upstream 100 bases:

>100_bases
ACCGAAGTGCAGATCGTCGTCCCCGCGCGCGCTGCGTACGTTCGACCACCCAAACGCTGGTGCTGGCCCTTTCAAAACGC
ACGACCCACGGAGACTCCCC

Downstream 100 bases:

>100_bases
AGGCGCCACCACCACTGGCGGCGGACGGGCGCCGCCCGCCTGCCCCGCTCACCGCGCCGGCGCACGCGGCAGCAAACAGT
GCAGCGGCGCCCAGCTACCC

Product: two-component system regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MADTTRPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMDLQMPRVDGVQAIQRIRQLDP
MAKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDTIRDVRRGQRRHVPASVAENIAAHVLDDALSARETEVLNLV
ATGCSNKQIGNALGISEETVKAHMKNILCKLGVRDRTHAVTVALRRGILSLET

Sequences:

>Translated_213_residues
MADTTRPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMDLQMPRVDGVQAIQRIRQLDP
MAKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDTIRDVRRGQRRHVPASVAENIAAHVLDDALSARETEVLNLV
ATGCSNKQIGNALGISEETVKAHMKNILCKLGVRDRTHAVTVALRRGILSLET
>Mature_212_residues
ADTTRPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMDLQMPRVDGVQAIQRIRQLDPM
AKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDTIRDVRRGQRRHVPASVAENIAAHVLDDALSARETEVLNLVA
TGCSNKQIGNALGISEETVKAHMKNILCKLGVRDRTHAVTVALRRGILSLET

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=37.378640776699, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1788222, Length=212, Percent_Identity=33.4905660377358, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786747, Length=196, Percent_Identity=31.1224489795918, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787473, Length=186, Percent_Identity=33.8709677419355, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1790102, Length=186, Percent_Identity=32.258064516129, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788712, Length=202, Percent_Identity=24.7524752475248, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082052, Length=133, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788546, Length=193, Percent_Identity=30.5699481865285, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788192, Length=105, Percent_Identity=35.2380952380952, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1788550, Length=104, Percent_Identity=36.5384615384615, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23328; Mature: 23197

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTTRPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMD
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEE
LQMPRVDGVQAIQRIRQLDPMAKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDT
CCCCCCCHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IRDVRRGQRRHVPASVAENIAAHVLDDALSARETEVLNLVATGCSNKQIGNALGISEETV
HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KAHMKNILCKLGVRDRTHAVTVALRRGILSLET
HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure 
ADTTRPTAVLVVDDHPLLRDGLSAMLGAERDMQVVGEAEDGEQAVDYYTRLRPDVVLMD
CCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEE
LQMPRVDGVQAIQRIRQLDPMAKVIVLTTYTGDVRAVRALQAGACGYLLKSALRRELVDT
CCCCCCCHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IRDVRRGQRRHVPASVAENIAAHVLDDALSARETEVLNLVATGCSNKQIGNALGISEETV
HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
KAHMKNILCKLGVRDRTHAVTVALRRGILSLET
HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]