Click here to switch to the map view.

The map label for this gene is 66768257

Identifier: 66768257

GI number: 66768257

Start: 2337580

End: 2338209

Strand: Reverse

Name: 66768257

Synonym: XC_1936

Alternate gene names: NA

Gene position: 2338209-2337580 (Counterclockwise)

Preceding gene: 77761177

Following gene: 66768253

Centisome position: 45.41

GC content: 66.67

Gene sequence:

>630_bases
ATGTCCACTGAATTCCGTCCGCTGATCGAGGTCCTGCGCGAGCTCAAGGCGCTGGCGCTGAAGAAGGCGTCCGGCTTTCT
GTTCGTCGTCACCGAGGAGAACCACTCCTGCATCATCCGCATCAATGCGGGTCAGATCGAAGAAGTGGTGTTCCGCATGC
TGCGCAATGATGAGGCCGTGCAACGCCTCACCATGGTCGGCGCCGCCAAGGCCCGCTTCCAGGTCGACCCCGGCGCCGGC
ATGGGCAAGCCCTCGCTGCTCAGCGAGGACTCGCGGCAGTGGCTGATGGGCGGCTTCGAACAGGATCTGGGCGGTGCGCC
GGCCCCAGTGCGTGCACCGGTTGCCGCCGCTCCGGTGCCGGCACCTGCCGCAGCCAGCGCAGCACCCACAGCGTCCGCAC
CGGCGTCTGTCGGCAGCGGCGCAGCGCCGGACGAAGCGGTTCGCCAAGCGCTGGAGAAAGTCGCATTGAATTACCTCGGC
CCGATCGCCGGCATGTTGTGCGACGAAGCCTGGGATGCCTCCAGCGACATCGAGCAGGTGCTCAGCCAGCTCGCTGCCAA
CCTGGCCACGCCGCAGGAAGCGCAAAAGTTCATGACCGACGCCCGCGTGGCACTGGCCAAGGTGCGTTGA

Upstream 100 bases:

>100_bases
TTTCCCGCCTGTCCAACAGCGTCCGGTTGGCCATGGAACGCCTCAGCAAGCGCTGAGCCGTGCTGTATAACTCCGCACCA
GATGATGCAAGGAAGACGCC

Downstream 100 bases:

>100_bases
GGCCAGCGTTCAACGCAACCCTGCAACAAGCCGCGCAATGCGCGGCTTTTTTTTGCGGCGGCATCGTGCGGCCTGATTGC
CAGCGATGAAACTGCAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSTEFRPLIEVLRELKALALKKASGFLFVVTEENHSCIIRINAGQIEEVVFRMLRNDEAVQRLTMVGAAKARFQVDPGAG
MGKPSLLSEDSRQWLMGGFEQDLGGAPAPVRAPVAAAPVPAPAAASAAPTASAPASVGSGAAPDEAVRQALEKVALNYLG
PIAGMLCDEAWDASSDIEQVLSQLAANLATPQEAQKFMTDARVALAKVR

Sequences:

>Translated_209_residues
MSTEFRPLIEVLRELKALALKKASGFLFVVTEENHSCIIRINAGQIEEVVFRMLRNDEAVQRLTMVGAAKARFQVDPGAG
MGKPSLLSEDSRQWLMGGFEQDLGGAPAPVRAPVAAAPVPAPAAASAAPTASAPASVGSGAAPDEAVRQALEKVALNYLG
PIAGMLCDEAWDASSDIEQVLSQLAANLATPQEAQKFMTDARVALAKVR
>Mature_208_residues
STEFRPLIEVLRELKALALKKASGFLFVVTEENHSCIIRINAGQIEEVVFRMLRNDEAVQRLTMVGAAKARFQVDPGAGM
GKPSLLSEDSRQWLMGGFEQDLGGAPAPVRAPVAAAPVPAPAAASAAPTASAPASVGSGAAPDEAVRQALEKVALNYLGP
IAGMLCDEAWDASSDIEQVLSQLAANLATPQEAQKFMTDARVALAKVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21979; Mature: 21848

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEFRPLIEVLRELKALALKKASGFLFVVTEENHSCIIRINAGQIEEVVFRMLRNDEAV
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCHHHH
QRLTMVGAAKARFQVDPGAGMGKPSLLSEDSRQWLMGGFEQDLGGAPAPVRAPVAAAPVP
HHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
APAAASAAPTASAPASVGSGAAPDEAVRQALEKVALNYLGPIAGMLCDEAWDASSDIEQV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSQLAANLATPQEAQKFMTDARVALAKVR
HHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STEFRPLIEVLRELKALALKKASGFLFVVTEENHSCIIRINAGQIEEVVFRMLRNDEAV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCHHHH
QRLTMVGAAKARFQVDPGAGMGKPSLLSEDSRQWLMGGFEQDLGGAPAPVRAPVAAAPVP
HHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
APAAASAAPTASAPASVGSGAAPDEAVRQALEKVALNYLGPIAGMLCDEAWDASSDIEQV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LSQLAANLATPQEAQKFMTDARVALAKVR
HHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA