| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is pat [H]
Identifier: 66768239
GI number: 66768239
Start: 2318664
End: 2319191
Strand: Reverse
Name: pat [H]
Synonym: XC_1918
Alternate gene names: 66768239
Gene position: 2319191-2318664 (Counterclockwise)
Preceding gene: 66768240
Following gene: 66768238
Centisome position: 45.04
GC content: 65.91
Gene sequence:
>528_bases ATGCCCGTCGAGCTGCGTGAGGTCCGCGACGCGGACATCCCGGCGATCACCGCGATCTACGCGGAGCAGATCGCCGGGTG CAACACCTACGAATACGTCGCGCCGTCGGCCGAGCAGATGCGCGGCCGCGTGCGCGCCATCGTGGACGCCGGTTATCCGT ATCTGGTGGCCGAACGCGATGGCGCGGTGATCGGGTACGCCTACGCAAGCAGCTACCGCGCACGCGCCGGCTACCGCTGG ACGGTGGAAAATTCGATTTATCTGGCCGCTGCCGCGCAAGGATGCGGCATCGGTTCGCAGCTGCTTGGCGCCTTGATTGC CGTCTGCGAGCAGCGCGGCTACCGGCAGATGATTGCCGTGATCGGCGATGCCACCAACCAGGCGTCACTGCGCCTGCATG AACGTTTTGAGTTTCGTACGGTCGGAGTCTTCACCGGACTGGGCCGCAAGCATGGCCGCTGGTTGGACGCGGTGCAGATG CAGCGCCCGCTCGGCTCCGGTCACACCGCCCCTCCTTCCGATGAATGA
Upstream 100 bases:
>100_bases GCAGCGCAGCGAGCATGTGCGGCGCATCTGGCCGTTCCTGCGCGACCGCCGCATCGACGCGTATGGCGATCTGCTCAAGC GTTACATCGACTGACCGCGC
Downstream 100 bases:
>100_bases CCCCATGACCGAAATCACCCCCGTGTTGCAGGACGATGCGCTGTCCGGCCAGCCGCACCGCATCGTCGAACGCGACGGTG TGCGCTACACCCTGCTCGGC
Product: phosphinothricin N-acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPVELREVRDADIPAITAIYAEQIAGCNTYEYVAPSAEQMRGRVRAIVDAGYPYLVAERDGAVIGYAYASSYRARAGYRW TVENSIYLAAAAQGCGIGSQLLGALIAVCEQRGYRQMIAVIGDATNQASLRLHERFEFRTVGVFTGLGRKHGRWLDAVQM QRPLGSGHTAPPSDE
Sequences:
>Translated_175_residues MPVELREVRDADIPAITAIYAEQIAGCNTYEYVAPSAEQMRGRVRAIVDAGYPYLVAERDGAVIGYAYASSYRARAGYRW TVENSIYLAAAAQGCGIGSQLLGALIAVCEQRGYRQMIAVIGDATNQASLRLHERFEFRTVGVFTGLGRKHGRWLDAVQM QRPLGSGHTAPPSDE >Mature_174_residues PVELREVRDADIPAITAIYAEQIAGCNTYEYVAPSAEQMRGRVRAIVDAGYPYLVAERDGAVIGYAYASSYRARAGYRWT VENSIYLAAAAQGCGIGSQLLGALIAVCEQRGYRQMIAVIGDATNQASLRLHERFEFRTVGVFTGLGRKHGRWLDAVQMQ RPLGSGHTAPPSDE
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=163, Percent_Identity=36.8098159509202, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 19115; Mature: 18984
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVELREVRDADIPAITAIYAEQIAGCNTYEYVAPSAEQMRGRVRAIVDAGYPYLVAERD CCCCCCHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHEEECCCCEEEEECC GAVIGYAYASSYRARAGYRWTVENSIYLAAAAQGCGIGSQLLGALIAVCEQRGYRQMIAV CCEEEEEECCCHHHCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH IGDATNQASLRLHERFEFRTVGVFTGLGRKHGRWLDAVQMQRPLGSGHTAPPSDE HCCCCCCHHEEHHHHHCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PVELREVRDADIPAITAIYAEQIAGCNTYEYVAPSAEQMRGRVRAIVDAGYPYLVAERD CCCCCHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHEEECCCCEEEEECC GAVIGYAYASSYRARAGYRWTVENSIYLAAAAQGCGIGSQLLGALIAVCEQRGYRQMIAV CCEEEEEECCCHHHCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH IGDATNQASLRLHERFEFRTVGVFTGLGRKHGRWLDAVQMQRPLGSGHTAPPSDE HCCCCCCHHEEHHHHHCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA