Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is 66768237

Identifier: 66768237

GI number: 66768237

Start: 2316530

End: 2317291

Strand: Direct

Name: 66768237

Synonym: XC_1916

Alternate gene names: NA

Gene position: 2316530-2317291 (Clockwise)

Preceding gene: 66768236

Following gene: 66768244

Centisome position: 44.99

GC content: 64.7

Gene sequence:

>762_bases
ATGACCCTGGTCACCCTCAACCTGCATCACGACCGCGAAGACTGGCCGGCACGCCGTGCCTATATCGCCAAGGAACTCAA
ACAGCTGGCGCCGGATGTGATCGCCTTGCAGGAAGTGATCGAACGCCGCGGCAGTGTGGAGAATCAGGCCGCCTGGCTGG
CCAGTCGGCTTGGCTACGCGTACACGTTCGCATCGGTCGACCCGCCCGGCGCGCCCAAGCGCTATGGCAACGCGCTGCTG
AGCAAGCGCAGCGTGCTGGCCCAGCATCAGCGCCTGCTGCAACCGCTGGACGATTACCGCGTGGCCGCGCATCTGCAGGT
TGATATGGATGGCCAGCCGGTCAACGTCTACGTGACGCATCTCAACGAGCGGTCCGATGCGCGCGGTGCGGCGACCCGCA
CCCGCCAGGTGGCCGACTTGCTGGACTTCATCGCGTCCAACAGCAACCAGGCGCCGGTGGTGATCGCCGGTGATTTCAAC
ACTGCGGCCGATACCCTGGATCTGGAAGCGCTACGCAAGGGCTATGGCGACAGCTATGGCAGCGTGCACCGCAACAGCGA
TGCAACTGTCAGCACCTTGAACCTGCATGTGTTCGACAAACCCGCGCGCATCGATCACGTGTTCTTCCAGCAGAACCGCC
TGCTCGCACGCGAGGCGCGCATCCTGTTCGACACCCCGTATGCCGAAGGCCGCTGGGCCTCGGACCATTACGGGGTGTGG
GTACGCCTGCAATTCGCGCCGGAGACGGCTGCCGCCCCGTAG

Upstream 100 bases:

>100_bases
GGCCCTGTCCTGCACGGGTGCGCACGCGGAGCAAGCCAACGTCCAGAACGCAGAACAAACATCGCGCTCGCAGCAAACCG
CCAGCGCGGCCCCGCGCGAG

Downstream 100 bases:

>100_bases
CAGCAGCCCTCGTCGTAGGAGCGTAGTTGGGCGCGATCAGGCTGCCTATTCCAGCTGTCAGTCGCGCAAGTCACCATTGC
GTCCAGGTGCGCTCCTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Polynucleotide Adenyltransferase

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYAYTFASVDPPGAPKRYGNALL
SKRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQPVNVYVTHLNERSDARGAATRTRQVADLLDFIASNSNQAPVVIAGDFN
TAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPYAEGRWASDHYGVW
VRLQFAPETAAAP

Sequences:

>Translated_253_residues
MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYAYTFASVDPPGAPKRYGNALL
SKRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQPVNVYVTHLNERSDARGAATRTRQVADLLDFIASNSNQAPVVIAGDFN
TAADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPYAEGRWASDHYGVW
VRLQFAPETAAAP
>Mature_252_residues
TLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYAYTFASVDPPGAPKRYGNALLS
KRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQPVNVYVTHLNERSDARGAATRTRQVADLLDFIASNSNQAPVVIAGDFNT
AADTLDLEALRKGYGDSYGSVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPYAEGRWASDHYGVWV
RLQFAPETAAAP

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28301; Mature: 28170

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYA
CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCE
YTFASVDPPGAPKRYGNALLSKRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQPVNVYVTH
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEEEEEECCCCCEEEEEEE
LNERSDARGAATRTRQVADLLDFIASNSNQAPVVIAGDFNTAADTLDLEALRKGYGDSYG
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
SVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPYAEGRWASDHYGVW
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCHHHHHHCEEEEECCCCCCCCCCCCCEEE
VRLQFAPETAAAP
EEEEECCCCCCCC
>Mature Secondary Structure 
TLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLASRLGYA
EEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCE
YTFASVDPPGAPKRYGNALLSKRSVLAQHQRLLQPLDDYRVAAHLQVDMDGQPVNVYVTH
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEEEEEECCCCCEEEEEEE
LNERSDARGAATRTRQVADLLDFIASNSNQAPVVIAGDFNTAADTLDLEALRKGYGDSYG
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
SVHRNSDATVSTLNLHVFDKPARIDHVFFQQNRLLAREARILFDTPYAEGRWASDHYGVW
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCHHHHHHCEEEEECCCCCCCCCCCCCEEE
VRLQFAPETAAAP
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA