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The map label for this gene is cycH [H]

Identifier: 66768211

GI number: 66768211

Start: 2287228

End: 2288247

Strand: Reverse

Name: cycH [H]

Synonym: XC_1890

Alternate gene names: 66768211

Gene position: 2288247-2287228 (Counterclockwise)

Preceding gene: 66768212

Following gene: 66768210

Centisome position: 44.44

GC content: 69.61

Gene sequence:

>1020_bases
GTGGTAATGGCGATCTTTGTCGCGTGCATCGTGGTGCTGGCGGTATTGGCTTTCGGCCTGGTGCTACGCCCGCTGTGGCG
TGAGGCGCGCGGCTTGGCCGGCGCGCTGGTGGTGTTGCTGCTGGCGGCCAGCGCCGCGCTTTACTGGCTGGTTGGCACGC
CGGCGGCGATCGAACAGACCGCCGACCGCCCGGCCAAGCCACGCACATTGGACGAGGCCATCGTGCAACTGCGCACTGCC
CTGGCGCGCAACCCAGACCAGGCCGAAGGCTGGGTGCTGCTGGGGCGGTCGCTGTCCAGCCAGGAGAAGTTCGCCGAAGC
GCGCGATGCATTTGCCCGTGCCGTGGCGCTGCGCCCGGACGAGCCGGATGTATTGGTGGCCGCCGCGCAAACGCGCATGC
TCGCCGATGACACACCGCAGCCGGATCACGAGGCGCAACGCCTGCTCGAACATGCGCTTGCGGTGCAGCCCGAACACGAG
CGTGCGCGCTGGTTCCTCGGCGTGGTGCAACGCCAGGCCGGGCAGCCCGCAGCCGCCAGCGCTACCTGGCTGCCGCTGCT
GGAGGTGGTGGACCCCAAGACCCGCCCCGGGCTGCTGGAACAGATCAATGCCGCGCGTCGCGAGGCCAAGCTGGAGCCGA
TCCAGGCCGCCGCCCCGGCAACCGCCACGGCCAGCACAGGCAAGGCCATTCGCGTGCGGGTGGTGCTGGACGCCGAGTTC
GCCAAGCGCGCCGGCTTGCCCGCCGACACCAGTGTGTTCGTGATTGCACGCTCCGCCGACACCCCGATGCCGGTGGCGGT
GGAAAAACACCCGCTCAGCGCGCTGCCGTTGACCGTCACCCTGGATGATGGCGACAGCCCGATGCCCACGCGCACGCTGT
CGTCGCTGGACAAGGTGCAACTGGTGGCCCGGCTCTCGCGCAGCGGCAATGCGATGCGCCAGAGCGACGATGTGGAAAGC
ACGCCGGTGACGGTGCAGTTGCCCACCGATGCGCAGTTGGAGCTGGTCATCGGCCGCTGA

Upstream 100 bases:

>100_bases
TCGGCCCGTTGCTGGTGCTACTGCTCGGCGGCACGGCGGTGGCGCTGGTGGTGCGGCGGCGCAGTGCGGCAGCGCCCACC
ACCAGCGTCGACGAGCAGGA

Downstream 100 bases:

>100_bases
GTGCTGCGTGCTTGTAAGCGCATAGCACTCCAGGCGCGCGCGGAAACACCTCGGCATTAAGAGCAGCTATCAAAACGACT
GCGCAGCCGCCAGGCGGGCG

Product: c-type cytochrome biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MVMAIFVACIVVLAVLAFGLVLRPLWREARGLAGALVVLLLAASAALYWLVGTPAAIEQTADRPAKPRTLDEAIVQLRTA
LARNPDQAEGWVLLGRSLSSQEKFAEARDAFARAVALRPDEPDVLVAAAQTRMLADDTPQPDHEAQRLLEHALAVQPEHE
RARWFLGVVQRQAGQPAAASATWLPLLEVVDPKTRPGLLEQINAARREAKLEPIQAAAPATATASTGKAIRVRVVLDAEF
AKRAGLPADTSVFVIARSADTPMPVAVEKHPLSALPLTVTLDDGDSPMPTRTLSSLDKVQLVARLSRSGNAMRQSDDVES
TPVTVQLPTDAQLELVIGR

Sequences:

>Translated_339_residues
MVMAIFVACIVVLAVLAFGLVLRPLWREARGLAGALVVLLLAASAALYWLVGTPAAIEQTADRPAKPRTLDEAIVQLRTA
LARNPDQAEGWVLLGRSLSSQEKFAEARDAFARAVALRPDEPDVLVAAAQTRMLADDTPQPDHEAQRLLEHALAVQPEHE
RARWFLGVVQRQAGQPAAASATWLPLLEVVDPKTRPGLLEQINAARREAKLEPIQAAAPATATASTGKAIRVRVVLDAEF
AKRAGLPADTSVFVIARSADTPMPVAVEKHPLSALPLTVTLDDGDSPMPTRTLSSLDKVQLVARLSRSGNAMRQSDDVES
TPVTVQLPTDAQLELVIGR
>Mature_339_residues
MVMAIFVACIVVLAVLAFGLVLRPLWREARGLAGALVVLLLAASAALYWLVGTPAAIEQTADRPAKPRTLDEAIVQLRTA
LARNPDQAEGWVLLGRSLSSQEKFAEARDAFARAVALRPDEPDVLVAAAQTRMLADDTPQPDHEAQRLLEHALAVQPEHE
RARWFLGVVQRQAGQPAAASATWLPLLEVVDPKTRPGLLEQINAARREAKLEPIQAAAPATATASTGKAIRVRVVLDAEF
AKRAGLPADTSVFVIARSADTPMPVAVEKHPLSALPLTVTLDDGDSPMPTRTLSSLDKVQLVARLSRSGNAMRQSDDVES
TPVTVQLPTDAQLELVIGR

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36360; Mature: 36360

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMAIFVACIVVLAVLAFGLVLRPLWREARGLAGALVVLLLAASAALYWLVGTPAAIEQT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
ADRPAKPRTLDEAIVQLRTALARNPDQAEGWVLLGRSLSSQEKFAEARDAFARAVALRPD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
EPDVLVAAAQTRMLADDTPQPDHEAQRLLEHALAVQPEHERARWFLGVVQRQAGQPAAAS
CCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
ATWLPLLEVVDPKTRPGLLEQINAARREAKLEPIQAAAPATATASTGKAIRVRVVLDAEF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEEEECHH
AKRAGLPADTSVFVIARSADTPMPVAVEKHPLSALPLTVTLDDGDSPMPTRTLSSLDKVQ
HHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
LVARLSRSGNAMRQSDDVESTPVTVQLPTDAQLELVIGR
HHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC
>Mature Secondary Structure
MVMAIFVACIVVLAVLAFGLVLRPLWREARGLAGALVVLLLAASAALYWLVGTPAAIEQT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
ADRPAKPRTLDEAIVQLRTALARNPDQAEGWVLLGRSLSSQEKFAEARDAFARAVALRPD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
EPDVLVAAAQTRMLADDTPQPDHEAQRLLEHALAVQPEHERARWFLGVVQRQAGQPAAAS
CCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
ATWLPLLEVVDPKTRPGLLEQINAARREAKLEPIQAAAPATATASTGKAIRVRVVLDAEF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEEEECHH
AKRAGLPADTSVFVIARSADTPMPVAVEKHPLSALPLTVTLDDGDSPMPTRTLSSLDKVQ
HHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
LVARLSRSGNAMRQSDDVESTPVTVQLPTDAQLELVIGR
HHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]