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The map label for this gene is 66768169

Identifier: 66768169

GI number: 66768169

Start: 2242355

End: 2243044

Strand: Direct

Name: 66768169

Synonym: XC_1848

Alternate gene names: NA

Gene position: 2242355-2243044 (Clockwise)

Preceding gene: 66768168

Following gene: 66768172

Centisome position: 43.55

GC content: 70.14

Gene sequence:

>690_bases
ATGAGCCAATCCAGCGCCCTGGACAGTTTTCTCGACAAGTGGCGCAGCCGCTGGCCGGAATGGTCGGTGGCCGAGCCCTT
CATTCCCGAACCGCAGCGTCGCCTGGCCGCGGCCTGGTTCGCATTGCTGCAGGAATGGGAGGACATCATGAACATCGCCG
GCGACCCGTTGCCGGCAGACGCCAAGCTGGCCTGGTGGCAGCAGGAATTGAACGACTGGTCGAACCAGCGCTCGCGTCAT
CCATTGGGGCGCGTGCTTGAACCGGTGCGCGCACCCTGGGCGCAGTTGGCGCAGACCTTGCCGGCGATGCAGGCCGCACG
TGCGCAGCCGGACGACCTGGCGCAGGCCATGGCGCGGCTGCAGGCATTTGCCGAAGCGGTGGTGGCGGTGGAAGCGGTGG
TCTTCGCACGCACACGCAGCAGCGATGCCACGGCCGTGGTGGTGCAATGGCTGGATGCGCGCCAGCGTGTGGCCGGCGAC
AGTGCCGCGCCGGGTGGCGTCGGTGCGCCGGCCTGGCGTGCGCAGCTGTTGCGCGCGTGGCCACGCAAGGCGGCGCTGGC
CAGGCCACATCGGGTCTGGTCGCGTCTGGCGCGGCTGCGCCTGCAGCGCGAGTTGGCCGGTCGCACGGCCTATGCGCCAC
CGATGCAGCAGCTCTGGCACAGCTGGCGCGCAGCCAGCGGCGCCGAATGA

Upstream 100 bases:

>100_bases
AGCTGGCAGGCCGACGTGCTGGTGGAACAGCCGCCGCAGTTGTGGGAGCCGGCCGCCTGGCCGCAGCCCTGATCTTTTCT
TTCGCTTTTCTGGACCCGCC

Downstream 100 bases:

>100_bases
ATAACCGCTGCTGCGGCCAGGCCGGCCACAGCAGCGCCACAGGCATGCAGACACCGCGTTGCTTAGATCGGTGAGTCGGG
CAGCACGCTGTGGTACGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSQSSALDSFLDKWRSRWPEWSVAEPFIPEPQRRLAAAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELNDWSNQRSRH
PLGRVLEPVRAPWAQLAQTLPAMQAARAQPDDLAQAMARLQAFAEAVVAVEAVVFARTRSSDATAVVVQWLDARQRVAGD
SAAPGGVGAPAWRAQLLRAWPRKAALARPHRVWSRLARLRLQRELAGRTAYAPPMQQLWHSWRAASGAE

Sequences:

>Translated_229_residues
MSQSSALDSFLDKWRSRWPEWSVAEPFIPEPQRRLAAAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELNDWSNQRSRH
PLGRVLEPVRAPWAQLAQTLPAMQAARAQPDDLAQAMARLQAFAEAVVAVEAVVFARTRSSDATAVVVQWLDARQRVAGD
SAAPGGVGAPAWRAQLLRAWPRKAALARPHRVWSRLARLRLQRELAGRTAYAPPMQQLWHSWRAASGAE
>Mature_228_residues
SQSSALDSFLDKWRSRWPEWSVAEPFIPEPQRRLAAAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELNDWSNQRSRHP
LGRVLEPVRAPWAQLAQTLPAMQAARAQPDDLAQAMARLQAFAEAVVAVEAVVFARTRSSDATAVVVQWLDARQRVAGDS
AAPGGVGAPAWRAQLLRAWPRKAALARPHRVWSRLARLRLQRELAGRTAYAPPMQQLWHSWRAASGAE

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25732; Mature: 25601

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSALDSFLDKWRSRWPEWSVAEPFIPEPQRRLAAAWFALLQEWEDIMNIAGDPLPAD
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKLAWWQQELNDWSNQRSRHPLGRVLEPVRAPWAQLAQTLPAMQAARAQPDDLAQAMARL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAFAEAVVAVEAVVFARTRSSDATAVVVQWLDARQRVAGDSAAPGGVGAPAWRAQLLRAW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
PRKAALARPHRVWSRLARLRLQRELAGRTAYAPPMQQLWHSWRAASGAE
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSSALDSFLDKWRSRWPEWSVAEPFIPEPQRRLAAAWFALLQEWEDIMNIAGDPLPAD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKLAWWQQELNDWSNQRSRHPLGRVLEPVRAPWAQLAQTLPAMQAARAQPDDLAQAMARL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAFAEAVVAVEAVVFARTRSSDATAVVVQWLDARQRVAGDSAAPGGVGAPAWRAQLLRAW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
PRKAALARPHRVWSRLARLRLQRELAGRTAYAPPMQQLWHSWRAASGAE
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA