| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is ubiG [H]
Identifier: 66768167
GI number: 66768167
Start: 2240829
End: 2241548
Strand: Direct
Name: ubiG [H]
Synonym: XC_1846
Alternate gene names: 66768167
Gene position: 2240829-2241548 (Clockwise)
Preceding gene: 66768166
Following gene: 66768168
Centisome position: 43.52
GC content: 65.83
Gene sequence:
>720_bases ATGAATCCGAATCCACAATCCACATCGTCCAATTTCCACCAGACCGAGCTGGACAAGTTCGCTGCGCTGGCCAACCGCTG GTGGGATGCCGACGGCCCGCAGAAGCCGCTGCATGCGCTCAATCCGGTGCGGCTGGACTACGTGGCCGCACGGGTTGCGC TGCCGGGCGCACGCGTGCTCGACGTCGGCTGCGGTGGTGGCCTGCTCAGTGAAGCGATGGCGCGCCTGGGCGCGCAAGTC ACCGCGATCGACCTGGCGCCGGAGCTGGTGAAAGTGGCGCGCCTGCACAGCCTGGAATCGAGCGTGCAGGTGGACTACCG CGTGCAGTCGGTGGAAGACCTGGCTGCCGAGCAGCCGGGCAGCTTCGATGCGGTGACCTGCATGGAAATGCTGGAGCACG TGCCAGACCCGCTGGCGATCATCCGCGCCTGCGCAAGCCTGCTCAAGCCGGGCGGCACGCTGTTCCTGTCTACACTCAAT CGCACGCCGGCAGCGTTTGCGCTGGCGGTAGTAGGCGCCGAATACATCGCGCGGTTGCTGCCCAAGGGCACGCATCACTA CAAGGATTTCATCAAGCCGTCCGAACTGGCCGCCTGGCTGCGCACTGCCGAGCTGCAGCTGCAAGACGTCAGCGGCATGC TGTACGAGCCGTGGCGCAACCGCGCGCGCTTGTCCTCGCGCACCGAAGTGAACTATCTGGCGTGTGCGGTGAAGCCGTGA
Upstream 100 bases:
>100_bases GACATGGATACCGCTGCCCTGGTCGCCAACGCGCGCCAGTGGCGCGACCGTATCCGCACCGTCCGCGCCTGAGCGCGGCC ATCGCATCACGGAGAGCCAC
Downstream 100 bases:
>100_bases CGAGCGGGGAATGGGGAATCGGGATTCGGGAATCGCAACGGCGGTTGGTTGCGGTCTTGATGTCGACCGGTTCCTGTCTG ATGGCCGATCGCGCTGGGAT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVALPGARVLDVGCGGGLLSEAMARLGAQV TAIDLAPELVKVARLHSLESSVQVDYRVQSVEDLAAEQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLN RTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVKP
Sequences:
>Translated_239_residues MNPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVALPGARVLDVGCGGGLLSEAMARLGAQV TAIDLAPELVKVARLHSLESSVQVDYRVQSVEDLAAEQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLN RTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVKP >Mature_239_residues MNPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVALPGARVLDVGCGGGLLSEAMARLGAQV TAIDLAPELVKVARLHSLESSVQVDYRVQSVEDLAAEQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLN RTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVKP
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=237, Percent_Identity=40.5063291139241, Blast_Score=191, Evalue=6e-49, Organism=Escherichia coli, GI1788564, Length=234, Percent_Identity=52.1367521367521, Blast_Score=265, Evalue=2e-72, Organism=Caenorhabditis elegans, GI115533050, Length=236, Percent_Identity=34.3220338983051, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6324476, Length=263, Percent_Identity=33.4600760456274, Blast_Score=152, Evalue=3e-38, Organism=Drosophila melanogaster, GI281365311, Length=244, Percent_Identity=36.8852459016393, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24585589, Length=265, Percent_Identity=33.9622641509434, Blast_Score=152, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 26039; Mature: 26039
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVALPGARVL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEE DVGCGGGLLSEAMARLGAQVTAIDLAPELVKVARLHSLESSVQVDYRVQSVEDLAAEQPG EECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVGAEYIARLL CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHC PKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVKP CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure MNPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVALPGARVL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEE DVGCGGGLLSEAMARLGAQVTAIDLAPELVKVARLHSLESSVQVDYRVQSVEDLAAEQPG EECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVGAEYIARLL CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHC PKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVKP CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]