Click here to switch to the map view.

The map label for this gene is yjeK [H]

Identifier: 66768163

GI number: 66768163

Start: 2236898

End: 2237926

Strand: Reverse

Name: yjeK [H]

Synonym: XC_1842

Alternate gene names: 66768163

Gene position: 2237926-2236898 (Counterclockwise)

Preceding gene: 77761171

Following gene: 66768159

Centisome position: 43.47

GC content: 71.04

Gene sequence:

>1029_bases
ATGATAACCGCAGCCCCTCTCGCCTTACAGCCATCCACACCGCCCGCCCTGCAGCCCCCGCGCTGGCAACAGCTGTGGCG
GCAGGCCGTGCGCGACCCGCGTGAGCTGCTGGCGCTGCTGGGGCTGGACGCGCAGGCGGCGGGCATCAGCGAGGACGCCG
CGGCCCAGTTCGCCGTGCGTGTGCCGCGCAGCTTCGTGGCGCGCATGCGCCCGGGAGACCTGACCGACCCGCTGTTGCGC
CAGGTATTGCCGCTGGATGCGGAGATGCGCGTGGTGCCTGGCTTTGCGCTCGACGCGGTGGGCGATGGCGCCGCCCGCAC
CACCACCGGGGTGATCCAGAAATACCGCGGCCGGGCTCTGCTGATCGCCACCGGCAGCTGCGCGGTGCATTGCCGGTACT
GCTTCCGCCGCCATTTCCCCTACGCCGAGGAAACCGCCGCCCGCGATGGCTGGCGCGAGGCCGTGGCGGCGATCGCCGCC
GATCCGGACATCGACGAGGTACTGCTCTCCGGCGGTGACCCGTTGTCGCTGACCACGCCCAAGCTGGCCGAGCTCACCGA
CGCCTTGGCCGCCATCCCGCATCTCAAGCGCCTGCGCATCCACAGCCGGCTGCCGGTGGTGTTGCCCGAACGCGTGGATG
CGCCGCTGCTGGCGTGGCTGCGCAGCCTGCCGTGGCCGGTGGCCTTCGTGATCCACGCCAACCACGCCAATGAATTCGAT
GCCGAGGTCGACGCCGCACTGCACGCGCTGCGTGGTGCCGGCGCACAGCTGCTCAACCAGGCGGTGCTGCTGCGCGGCGT
CAACGACAGCGTGGACGCACTAGCGGCGCTGAGCGAGCGCAGCTTCGCCGCCGGCGTGCTGCCGTACTACCTGCATCAGC
TGGACCGCGTGGCCGGCGTGGCGCATTTCGAAGTCGACGACGCACGCGCCCGTGCGCTGCATGCCGAGCTGGCAACGCGC
CTGTCCGGCTATCTGGTGCCGCGCCTGGTGCGCGAGATTCCCGGCGATACGGGAAAGCGGCCACTGTAA

Upstream 100 bases:

>100_bases
GTGCAGCTCCTCGATAAGGCGACGGCCCGCCACTTCCTGGCCGGCCGGATTAGAATGGGGCGCCCGCCGCAACCGGCGGG
CATTGCTTTTGTGACCGCAC

Downstream 100 bases:

>100_bases
ATACCTCGGTGGCGCGCGGGAGTGGCATGTAGAGCGCAGCTTTCCGCTCGGCTGCGGGGAAACAAACCAAACCACCATCT
CGTAGGAGCGCACCCGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MITAAPLALQPSTPPALQPPRWQQLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLR
QVLPLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFD
AEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATR
LSGYLVPRLVREIPGDTGKRPL

Sequences:

>Translated_342_residues
MITAAPLALQPSTPPALQPPRWQQLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLR
QVLPLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFD
AEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATR
LSGYLVPRLVREIPGDTGKRPL
>Mature_342_residues
MITAAPLALQPSTPPALQPPRWQQLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLR
QVLPLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAA
DPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFD
AEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATR
LSGYLVPRLVREIPGDTGKRPL

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=322, Percent_Identity=49.0683229813665, Blast_Score=303, Evalue=1e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37073; Mature: 37073

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAAPLALQPSTPPALQPPRWQQLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVR
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHCCCCHHHHHHHHHH
VPRSFVARMRPGDLTDPLLRQVLPLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRAL
CCHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTP
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
KLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFD
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHH
AEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHFEVDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MITAAPLALQPSTPPALQPPRWQQLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVR
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHCCCCHHHHHHHHHH
VPRSFVARMRPGDLTDPLLRQVLPLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRAL
CCHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHCCCEE
LIATGSCAVHCRYCFRRHFPYAEETAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTP
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
KLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFD
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHH
AEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AHFEVDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]