BacMap

Definition	Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession	NC_007086
Length	5,148,708

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The map label for this gene is dbpA [H]

Identifier: 66768154

GI number: 66768154

Start: 2226058

End: 2227434

Strand: Reverse

Name: dbpA [H]

Synonym: XC_1833

Alternate gene names: 66768154

Gene position: 2227434-2226058 (Counterclockwise)

Preceding gene: 66768156

Following gene: 66768151

Centisome position: 43.26

GC content: 67.25

Gene sequence:

>1377_bases
ATGAACGAATTCTCCGCGCTGCCGCTCTCGCCAGCCTTGGCCCCCGGCATCGATGCCCTGGGCTACACCACCCTCACGCC
GATCCAGGCGCAGAGCCTGCCGCCGATCCTCCAGGGGCTGGATGTGATTGCCCAAGCGCCCACCGGCAGCGGCAAGACCG
CCGCGTTCGGGCTGGGCCTGCTGCAAAAGCTCGACCCGGCACTGACCCGTGCGCAAGCGCTCGTGCTGTGCCCCACGCGC
GAACTGGCAGACCAGGTCGGCAAGCAACTGCGCAAGCTGGCCACCGGCATTCCCAACATGAAGTTGCTGGTGCTCACCGG
CGGCATGCCGCTTGGTCCGCAGCTGGCATCGCTCGAAGCGCACGACCCGCAGGTCGTGGTCGGCACGCCCGGCCGCATCC
AGGAACTGGCGCGCAAACGCGCCCTGCATCTGGGCGGCGTGCGCACGCTGGTGCTGGACGAGGCCGACCGCATGCTCGAC
ATGGGCTTTGAAGAACCCATCCGCGAGATCGCCAGCCGCTGCGACAAACACCGCCAGAGCCTGCTGTTCTCGGCGACCTT
CCCCGACATCATCCGCACGCTGGCGCGCGAGCTGTTGAAGGACCCGGTGGAAATCACCGTGGAAGGTGCGGACAACGCAC
CGGAGATCGACCAGCAGTTCTTCGAAGTGGACCCCACTTATCGGCAGAAGGCGGTGGCCGGGCTGCTGCTGCGCTTCAAT
CCCGAATCCAGCGTGGTGTTCTGCAATACCCGCAAGGAAGTGGACGAAGTCGCCGGCTCGCTGCAGGAGTTCGGGTTCTC
CGCGCTGGCATTGCATGGCGACATGGAGCAACGCGACCGCGACGAGGTGCTGGTGCGCTTCGTCAATCGCAGCTGCAACG
TACTGGTTGCCAGTGACGTGGCCGCGCGCGGCCTGGATGTGGAAGACCTCGCGGCAGTGGTGAATTACGAGCTTCCCACC
GACACCGAAACCTATCGCCACCGCATCGGCCGGACTGCGCGCGCCGGCAAGCACGGCTTGGCACTCAGCCTGGTGGCGCC
GCGCGAAAGCGCTCGTGCGCAGGCGCTGGAGGCCGAGCACGGCCAGCCGCTCAAGTGGTCACGCGCACCGCTGGCCACCG
CACGCCCGGCGCAATTGCCGCTGGCCGCGATGACCACGCTGCGCATCGACGGCGGCAAGACCGACAAACTGCGTGCCGGC
GACATTCTGGGCGCATTGACCGGCGAAGCAGGCTTGTCGGGTGCGGCGATCGGCAAGATCGCCATCTACCCCACCCGCTC
GTACGTGGCGATTGCGCGGGCGCAGGTCGCTCGTGCACTGACCCACTTGCAGGCCGGCAAGATCAAGGGCCGCCGCTTCC
GGGTGACCAAGCTCTAG

Upstream 100 bases:

>100_bases
GGGCTAATTGTACGGGAATCGGGAATGGTGAATCGGGAATGGAAAAGCCTCGCCGTTGCGATTCCCGATTCACCACTCCC
GATTCCCGTTAAAATGCGCC

Downstream 100 bases:

>100_bases
GCAGCGCGTCTAGCCGAATCAGGGAGCCCACGCAGGTGGGCTCGACGGCGCAGCGGCTTGGCCGCTGCACAGGTACAGCG
ATCCCTTGCTCAGTAGCTCA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNEFSALPLSPALAPGIDALGYTTLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLLVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLARELLKDPVEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLAAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRESARAQALEAEHGQPLKWSRAPLATARPAQLPLAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVARALTHLQAGKIKGRRFRVTKL

Sequences:

>Translated_458_residues
MNEFSALPLSPALAPGIDALGYTTLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLLVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLARELLKDPVEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLAAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRESARAQALEAEHGQPLKWSRAPLATARPAQLPLAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVARALTHLQAGKIKGRRFRVTKL
>Mature_458_residues
MNEFSALPLSPALAPGIDALGYTTLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLLVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLARELLKDPVEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLAAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRESARAQALEAEHGQPLKWSRAPLATARPAQLPLAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVARALTHLQAGKIKGRRFRVTKL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=41.5254237288136, Blast_Score=238, Evalue=7e-63,
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=36.6279069767442, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI20149629, Length=407, Percent_Identity=36.1179361179361, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI45446747, Length=345, Percent_Identity=40, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI45446743, Length=345, Percent_Identity=40, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=33.5164835164835, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=36.1823361823362, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=34.0425531914894, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=37.2549019607843, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.1508379888268, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.1508379888268, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.1508379888268, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI4758138, Length=337, Percent_Identity=38.2789317507418, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=37.1014492753623, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=37.1014492753623, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=33.0508474576271, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327773, Length=335, Percent_Identity=37.0149253731343, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=35.8166189111748, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=36.9973190348526, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=36.9973190348526, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=36.9973190348526, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=35.8288770053476, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=34.8958333333333, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=35.5670103092784, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=36.4611260053619, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=36.4611260053619, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=36.3888888888889, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI164419743, Length=355, Percent_Identity=37.4647887323944, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI51094101, Length=355, Percent_Identity=37.4647887323944, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=35.1585014409222, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI55749865, Length=360, Percent_Identity=32.2222222222222, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=33.8541666666667, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=33.9622641509434, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=33.6927223719677, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI41327779, Length=391, Percent_Identity=31.7135549872123, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=36.7847411444142, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI41327776, Length=406, Percent_Identity=33.4975369458128, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI256223453, Length=354, Percent_Identity=31.3559322033898, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI62241022, Length=355, Percent_Identity=33.5211267605634, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI62241024, Length=332, Percent_Identity=34.0361445783133, Blast_Score=175, Evalue=8e-44,
Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=32.7751196172249, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38327634, Length=347, Percent_Identity=34.5821325648415, Blast_Score=165, Evalue=6e-41,
Organism=Homo sapiens, GI164419732, Length=348, Percent_Identity=31.3218390804598, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=334, Percent_Identity=30.5389221556886, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI38569505, Length=334, Percent_Identity=30.5389221556886, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=30.8290155440415, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=33.8658146964856, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.0419161676647, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI154759257, Length=424, Percent_Identity=27.5943396226415, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI256773275, Length=370, Percent_Identity=30.2702702702703, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI20336298, Length=240, Percent_Identity=35.8333333333333, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4557365, Length=97, Percent_Identity=34.020618556701, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1787605, Length=456, Percent_Identity=52.1929824561403, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=42.0749279538905, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1787016, Length=356, Percent_Identity=42.6966292134831, Blast_Score=255, Evalue=5e-69,
Organism=Escherichia coli, GI1788930, Length=333, Percent_Identity=42.042042042042, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1790214, Length=392, Percent_Identity=34.9489795918367, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI48994977, Length=360, Percent_Identity=24.7222222222222, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=39.8255813953488, Blast_Score=245, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=39.8255813953488, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=35.5555555555556, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=37.431693989071, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=33.0532212885154, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=36.5122615803815, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=36.5122615803815, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=36.5122615803815, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=38.8888888888889, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=32.3943661971831, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=36.5789473684211, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=36.9747899159664, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=368, Percent_Identity=36.9565217391304, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=34.8051948051948, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=33.695652173913, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=34.5714285714286, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=35.3099730458221, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=374, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.2903225806452, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=35.6353591160221, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=35.2785145888594, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=36.5591397849462, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.8525469168901, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.8066157760814, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=31.8066157760814, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=34.0845070422535, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=31.8066157760814, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI193206561, Length=321, Percent_Identity=32.0872274143302, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=32.6315789473684, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=34.6153846153846, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=30.7692307692308, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=26.536312849162, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=397, Percent_Identity=28.7153652392947, Blast_Score=145, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=27.4271844660194, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=32.2857142857143, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=34.6733668341709, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=28.9340101522843, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=29.3800539083558, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=371, Percent_Identity=29.9191374663073, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=27.5964391691395, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=27.7777777777778, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25148291, Length=401, Percent_Identity=26.9326683291771, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=38.7755102040816, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI25145561, Length=355, Percent_Identity=24.2253521126761, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=36.8715083798883, Blast_Score=249, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=38.8429752066116, Blast_Score=229, Evalue=8e-61,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=37.4005305039788, Blast_Score=221, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=38.8888888888889, Blast_Score=219, Evalue=8e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=33.6111111111111, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6324217, Length=338, Percent_Identity=38.1656804733728, Blast_Score=213, Evalue=6e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=346, Percent_Identity=37.2832369942197, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=32.9758713136729, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=32.9758713136729, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=32.0113314447592, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6323021, Length=383, Percent_Identity=35.509138381201, Blast_Score=202, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6324620, Length=383, Percent_Identity=32.6370757180157, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=457, Percent_Identity=32.1663019693654, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=37.1900826446281, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=31.8518518518519, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=34.3163538873995, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=30.3030303030303, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=31.7548746518106, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6323947, Length=373, Percent_Identity=32.7077747989276, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=30.2702702702703, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=29.6103896103896, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=29.2834890965732, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=25, Blast_Score=133, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.5681818181818, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=30.6010928961749, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24645031, Length=345, Percent_Identity=38.5507246376812, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=38.0165289256198, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24662330, Length=344, Percent_Identity=40.9883720930233, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=33.5164835164835, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=33.5164835164835, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=37.7410468319559, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.5, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21355075, Length=379, Percent_Identity=35.0923482849604, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=37.7777777777778, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=38, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=38.135593220339, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24582080, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582078, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI17136248, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582075, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI18857967, Length=355, Percent_Identity=36.6197183098592, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=37.1508379888268, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24644483, Length=368, Percent_Identity=34.7826086956522, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI281361218, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644481, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644487, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI45551833, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644485, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644479, Length=368, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=36.3143631436314, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=33.5135135135135, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=32.3943661971831, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=32.3943661971831, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=32.3943661971831, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=35.3887399463807, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=33.4224598930481, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281365720, Length=299, Percent_Identity=37.4581939799331, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=32.409972299169, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=32.409972299169, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=27.9778393351801, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=31.3829787234043, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=31.5315315315315, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=27.4809160305344, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24666101, Length=358, Percent_Identity=30.4469273743017, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI20130173, Length=315, Percent_Identity=33.6507936507937, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI19920478, Length=379, Percent_Identity=29.8153034300792, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI17136666, Length=401, Percent_Identity=27.431421446384, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI18859659, Length=281, Percent_Identity=31.3167259786477, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571338, Length=281, Percent_Identity=31.3167259786477, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24640164, Length=331, Percent_Identity=22.9607250755287, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49314; Mature: 49314

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFSALPLSPALAPGIDALGYTTLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLLVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDIIRTLARELLKDPVEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHEEEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLAAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRESARAQALEAEH
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHHCC
GQPLKWSRAPLATARPAQLPLAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEECCCHHHECCCCCCCCCCEECEE
AIYPTRSYVAIARAQVARALTHLQAGKIKGRRFRVTKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MNEFSALPLSPALAPGIDALGYTTLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLLVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDIIRTLARELLKDPVEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHEEEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLAAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRESARAQALEAEH
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHHCC
GQPLKWSRAPLATARPAQLPLAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEECCCHHHECCCCCCCCCCEECEE
AIYPTRSYVAIARAQVARALTHLQAGKIKGRRFRVTKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]