Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

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The map label for this gene is ybaP [C]

Identifier: 66768140

GI number: 66768140

Start: 2212278

End: 2213243

Strand: Direct

Name: ybaP [C]

Synonym: XC_1819

Alternate gene names: 66768140

Gene position: 2212278-2213243 (Clockwise)

Preceding gene: 66768139

Following gene: 66768144

Centisome position: 42.97

GC content: 67.81

Gene sequence:

>966_bases
ATGCGCTGGATGACACGGGCGCGTCGCGCGCTGCTGCCCGCCTGCGCCGGCCTGCTGGCGATCGCTGCGTTGTGGGGCGG
CACAGCGGCTGCCGCCTCGGCACCTGGCATCGCTGCTGCCGCCAGCCCGCCGGTGCCGCTGCTGTGGAAGGTCGATGGCA
AGGGCGGCACCCTGTATCTGCTTGGTTCGTTCCATCTGCTCAAGCCCGACGACTACCCGCTGTCACCGGATGTGCTGCAG
GCCTTTGCGCAGGCCGACCGGCTCACCTTCGAACTGCCACCGGCCGATGTGCAGTCGCCCGAATTGGCGGCCAAGATGCT
GCGTGCCGCCCGCCGCAGCGATGGCAAGCGCCTGCAGGATGCACTCGAAGCCCCAACCTGGCAGGCGCTCGCCACGCAGG
CGCGCAAGCACGGCATCCCGCTGGAGAGCCTGCAGCCGATGAAACCGTGGTTTGTCGCCCTGACGCTCAGCCTGGCCGAG
ATGCGACGCCAGGGCATGCAGGCCGATGCAGGGCTGGACAATTACCTGATGCAGCTGGCGCAGGCACGTGGCAAACCGGC
CGATGGCCTGGAGCGCGCGGACGAACAGATCGCCCTGCTCGACAGCATGACTGCGACCGAACAACAGCAACTGCTGGCCG
AAACCCTCGATGAGGCCGGTGCCGCCGATCAGGTCAATGCGCTGCACGATGCCTGGCGCCGTGGTGACGTCCATCTGCTG
ACCACGCAAATGGCCGAAGACATGCGCAAGCAGTATCCCGCGCTGTATCAAGACATCAACGTGGAGCGCAATGCGCGCTG
GGTGCCGCGTCTGGAGCAGCGGCTGGGCAAGCAGGGCGGCACTACGCTGGTGGTGGTCGGTGCCTTGCACCTGCTGGGTC
GCGACGGGGTGGTGGAGCGTCTGCGTGCACGCGGGTATCGCGTGGAGCGGATCTGCAAGGCCTGCGCGGAGCAGGCTGGC
CACTGA

Upstream 100 bases:

>100_bases
GCGCGTTCACGCCGTTTGCGACCTGCCCGTTGCCACCGCCGGAAAATCGCATCGACCTGGCCGTATCGGCGGGCGAAAAA
GCCTACAAGGCAGCGCATTG

Downstream 100 bases:

>100_bases
TGTGATGACGGGCGCGGCGCAGGTTGCGCCACGCCAGTCAGGGCTTAGCCGCGGTTGCGGGCCTTGCCGGTGGTGCCGGT
CGCGTTGCTGCTGCTGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: GumN Protein; Gumn Family Protein; SLA2 Protein; GumN-Family Protein; Lipoprotein; GumN Protein Superfamily; Secreted Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ
AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE
MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL
TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG
H

Sequences:

>Translated_321_residues
MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ
AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE
MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL
TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG
H
>Mature_321_residues
MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ
AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE
MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL
TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG
H

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35059; Mature: 35059

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYL
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEE
LGSFHLLKPDDYPLSPDVLQAFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQD
EECEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH
ALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAEMRRQGMQADAGLDNYLMQLA
HHCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH
TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVER
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHH
LRARGYRVERICKACAEQAGH
HHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYL
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEE
LGSFHLLKPDDYPLSPDVLQAFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQD
EECEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH
ALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAEMRRQGMQADAGLDNYLMQLA
HHCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH
TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVER
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHH
LRARGYRVERICKACAEQAGH
HHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA