| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is mutL
Identifier: 66768138
GI number: 66768138
Start: 2209466
End: 2211340
Strand: Direct
Name: mutL
Synonym: XC_1817
Alternate gene names: 66768138
Gene position: 2209466-2211340 (Clockwise)
Preceding gene: 66768137
Following gene: 66768139
Centisome position: 42.91
GC content: 68.64
Gene sequence:
>1875_bases ATGGCGATCCGGCAATTGCCCGAGATCCTGATCAACCAGATCGCTGCCGGCGAGGTGGTCGAGCGCCCGGCATCGGTCGT CAAGGAACTGGTCGAAAACGCCCTCGATGCCGGCGCCACCCGCGTGGATATCGATCTGGAAGAGGGCGGCGTGCGGCTGA TCCGCATCCGCGACAATGGCGGCGGCATTGCGCCGGAAGAGCTGCCGCTGGCGGTGTCGCGTCATGCCACCAGCAAGATC GCCTCGCTGGATGATCTGGAAACCGTCGCCACGCTGGGCTTCCGCGGCGAAGCGTTGCCGTCCATCGCCTCGGTCAGCCG CTTTACGCTGGCCTCGCGTCGCCCGGATGCCGAGCACGGCTCCGCGCTGCAGATCGAAGGCGGGCGCCTGGGCGAGGTGA TGCCGCGTGCGCATGCGCCGGGCACCACCGTTGAGGTGCGCGAGCTGTTCTTCAACGTGCCGGCACGGCGCAAGTTCCTG CGCGCCGAGCGCACCGAGTTGGGCCATATCGAAGAGTGGCTGCGTTCGCTGGCACTGGCGCGCCCGGACGTGGAATTGCG CGTCTCGCATAACGGCAAACCGTCGCGGCGCTACAAGCCGGGCGATCTGTATTCGGACGCGCGGCTGGGCGAGACCTTGG GCGAGGATTTCGCGCGCCAGGCGCTGCGCGTGGACCACAGCGGTGCCGGCCTGCGCCTGCACGGCTGGGTGGCGCAGCCG CATTACTCGCGCGCCAGTACCGATCAGCAGTATCTCTACGTCAACGGCCGCTCGGTGCGGGATCGCAGCGTGGCGCATGC GGTGAAGATGGCCTACGGCGATGTGCTGTTCCACGGGCGCCAGCCGGCATATGTGCTGTTTCTCGAGCTGGACCCTGCGC GCGTGGACGTCAACGTGCACCCGGCCAAACACGAGGTGCGCTTCCGCGAGGCGCGGCTGATCCACGACTTCGTCTATCGC ACTCTGCAGGACGCACTAGCGCAGACCCGTGCCGGCGCGCTGCCCGCTGATGTTGGGGTCGGGGGGGCGGCAGCCCTCGG TATCGGCGCCGTTGCCGCGCAGGGCGGCGGAAGCTACGTTGCTGACGCCGGTGCAGGGCATCCGGGCGCTGGCAGTGGCT CCGGCTATGCAAGCTGGGCGCCGTCGCAGGCACCGCTGGGTTTGCGCGTAGACGAGGCGCGCGCCGCCTACGCCGCGTTG TATGCCCCTGCGGCCGGCAGCGCGTTGCGCGACGACGGGCAACCGGTGCTGTCCGGCACCGGCTTGCCGGCGACCGCGCA CGACAGCGGAGTCCCGCCATTGGGCTACGCGGTGGCGCAGTTGCACGGCATCTATATCCTCGCGGAAAACGCCGAAGGCC TGATCGTGGTCGACATGCATGCCGCGCATGAGCGTATCGGCTACGAACGCCTCAAGCAGGCGCACGACAGCATTGGCCTG CATGCGCAGCCGCTGCTGGTACCGATGACGCTGGCAGTGGGCGAGCGCGAGGCCGACACCGCCGAGCGCGAGGCCGATAC GCTTGCCAGCCTGGGCTTCGAAATCACCCGCAGCGGTCCGCAATCGCTGCACGTGCGCAGCATTCCGGCGCTGCTCGCCA ATGCCGACCCGGAGGCGTTGTTACGCGATGTGCTCGGCGATCTGCGTGAGCACGGCCAGAGCCGGCGCATCGCCACCGCG CGCGACGAGTTGCTGTCCACCATGGCCTGCCACGGCGCGGTGCGTGCAAACCGCCGGCTCACCGTGCCGGAAATGAACGC CTTGCTGCGCGACATGGAAGCCACCGAGCGCTCGGGCCAATGCAACCATGGCCGGCCAACCTGGGCCCGGTTTACGCTGG GCGAAATCGATCGCTGGTTCCTGAGGGGACGTTGA
Upstream 100 bases:
>100_bases GCCGGATGGCCGTGCCGACGTTTTTCCCCTTGATGTCATCATTCGCCCATGCGGGCGGCCACTGCGTGCGCGCAGCGCAT CTGCCAGGGAGCTCCCGCTG
Downstream 100 bases:
>100_bases TGACAGTGCTGCACAGGGGGAGGGGCTGGCTGCTCGGCATGTTGGTAGCGGTAGGTGTGCTCGGCTGTGGCCGCGAGGCA CCACCCGCACCGGCGCCAGT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKI ASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHGSALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFL RAERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGEDFARQALRVDHSGAGLRLHGWVAQP HYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYR TLQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGSYVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAAL YAPAAGSALRDDGQPVLSGTGLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSIGL HAQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPEALLRDVLGDLREHGQSRRIATA RDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLGEIDRWFLRGR
Sequences:
>Translated_624_residues MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKI ASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHGSALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFL RAERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGEDFARQALRVDHSGAGLRLHGWVAQP HYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYR TLQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGSYVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAAL YAPAAGSALRDDGQPVLSGTGLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSIGL HAQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPEALLRDVLGDLREHGQSRRIATA RDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLGEIDRWFLRGR >Mature_623_residues AIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNGGGIAPEELPLAVSRHATSKIA SLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHGSALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLR AERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGEDFARQALRVDHSGAGLRLHGWVAQPH YSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVRFREARLIHDFVYRT LQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGSYVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAALY APAAGSALRDDGQPVLSGTGLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSIGLH AQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPEALLRDVLGDLREHGQSRRIATAR DELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLGEIDRWFLRGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=33.6363636363636, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI4505913, Length=342, Percent_Identity=29.5321637426901, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI310128478, Length=342, Percent_Identity=29.5321637426901, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI189458898, Length=351, Percent_Identity=29.6296296296296, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI4505911, Length=351, Percent_Identity=29.6296296296296, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI189458896, Length=344, Percent_Identity=30.5232558139535, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128480, Length=298, Percent_Identity=26.8456375838926, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI263191589, Length=235, Percent_Identity=27.2340425531915, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI91992162, Length=330, Percent_Identity=25.7575757575758, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI91992160, Length=330, Percent_Identity=25.7575757575758, Blast_Score=83, Evalue=7e-16, Organism=Escherichia coli, GI1790612, Length=564, Percent_Identity=43.9716312056738, Blast_Score=393, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71991825, Length=318, Percent_Identity=34.5911949685535, Blast_Score=185, Evalue=7e-47, Organism=Caenorhabditis elegans, GI17562796, Length=336, Percent_Identity=28.8690476190476, Blast_Score=141, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6323819, Length=315, Percent_Identity=33.968253968254, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=365, Percent_Identity=27.9452054794521, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6325093, Length=720, Percent_Identity=21.8055555555556, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323063, Length=367, Percent_Identity=24.2506811989101, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17136968, Length=312, Percent_Identity=34.9358974358974, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17136970, Length=369, Percent_Identity=28.4552845528455, Blast_Score=126, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_XANC8 (Q4UVP3)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242900.1 - HSSP: P23367 - ProteinModelPortal: Q4UVP3 - STRING: Q4UVP3 - GeneID: 3380364 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1817 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FLFINNR - PhylomeDB: Q4UVP3 - ProtClustDB: PRK00095 - BioCyc: XCAM314565:XC_1817-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 67195; Mature: 67063
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCC GGIAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHG CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGEDFARQALRVDHSGAGLRLHGWVAQP CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC HYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVH CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEC PAKHEVRFREARLIHDFVYRTLQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGSYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCEE ADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAALYAPAAGSALRDDGQPVLSGT ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECC GLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSIGL CCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCC HAQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPEAL CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEECCCCCCEEHHHHHHHHHCCCHHHH LRDVLGDLREHGQSRRIATARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC CNHGRPTWARFTLGEIDRWFLRGR CCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure AIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCC GGIAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHG CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPDVELRVSHNGKPSRRYKPGDLYSDARLGETLGEDFARQALRVDHSGAGLRLHGWVAQP CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC HYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVH CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEC PAKHEVRFREARLIHDFVYRTLQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGSYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCEE ADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAALYAPAAGSALRDDGQPVLSGT ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECC GLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSIGL CCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCC HAQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPEAL CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEECCCCCCEEHHHHHHHHHCCCHHHH LRDVLGDLREHGQSRRIATARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC CNHGRPTWARFTLGEIDRWFLRGR CCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA