| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66768054
Identifier: 66768054
GI number: 66768054
Start: 2093082
End: 2094467
Strand: Direct
Name: 66768054
Synonym: XC_1731
Alternate gene names: NA
Gene position: 2093082-2094467 (Clockwise)
Preceding gene: 66768053
Following gene: 77761165
Centisome position: 40.65
GC content: 67.75
Gene sequence:
>1386_bases ATGCAGCAGTCGTTGAAGCAGCATTCGTTACGCGCCGTGCTGGCGTTGCTGGCGCTCGCCTGCGTGCCCGCCGTGGCTGC CGACAAGGCGGCCGAGCCGAACACGCAGGTGCCGCTGGGCTCCACGCACTATGTGGCCGATGGCTTCCCGGACCGGATCG TCGCCACCCCGGCGCAGGATGCCGCGCGAGGCTTCGCAGTGGCCTGGCGCACCGATGCCAGCGTCACTGCGCCCTGGCTG GAACTGGTGGTAGCCGGCGATTCGCCGGATGTGGGCACGCCGCGGCGCATCCAGGCCACGACCGCGACCTTGAGCTCGGA AAACGGCGCCTCGCATCATCACCGCGCCGACATCGACGGACTCACGCCGGACACGCTCTACGCCTATCGCGTGCAGGGCC ACGGCACCTGGGGCGCGTGGAATCACTTCCGTACCGCAGCCACGCCCGGCACCCCGCTGACACTGTTGTATTTCGGCGAT ACGCAGAACAAGAATCTCAGCCTGGTGTCGCGGTTGATTCGTCAGGCCTGGCGCTCGGCACCGGAGGCGCGGCTGGCGCT GTTCGCCGGCGATCTGGTCAGCGGCAAGGACGGCCAGGACGATAACGAGTGGGCCGAATGGTTCGAAGCCGGCCGCTGGT TGCTGGAAGGCACCGCGGTGGCGCCAGCACCGGGCAATCACGAATATCACGAAGACGCCGAAGACACCCCGCAGGCCACC CGCACCCTGGGCGGCCATTGGCCGGTGACCTTCGCGCTGCCGCGCAACGGCCCGGCCGCCACCGCGCGCACCAGTTACTG GTTCGATTACCAGGGCGTGCGCATCGCAGTGCTCGACGGCACCTCGGCGCTGGATCTGGGCACCGGGCAGGCACAGGCGC AGTGGCTGGATGGCGTGCTCGCCGACAACCCGCATCCGTGGTCGATCGTGCTGATCCATCAGCCGTTCTTTTCGCCGCGT GCCGACCGCGAGAACCAAAAGCTGGTCGAGCAAGTGTTGCCGGTGATCCGCCGCCATAAGGTCGATCTGGTGCTGCAGGG CCACGACCATACCTACGGCCGTCGCGGCGATGACGGCGGCCAGCCAACGCCGGTGTTCGTGGTGTCGGTAGCCGGCCCCA AGCAGTACCGGCTCTCGGACATGGCGCGCAAGACCATGCGCCCGGTGGGCGAAGACACCCAGCTGTATCAGGTGCTGCGC ATCGATCAACAGAAGCTCGTCTACGAGTCGCGCACGGCGACCGGACGCCTCTACGATGCGTTCGAGCTGCAACGCCGCGC AGATGGGTCCAAGCAGTTGATCGAGCACGAGGCGGGCCGGATTGCGCCACGCGATTGCCCGCGCAGTGCCACGCTCAAGG GGCGGGCGGATCGGTGTTGGGAATGA
Upstream 100 bases:
>100_bases GGGTGTTCTACGCGCTGCACGACGACCAGGCCGTGGCCGCATTCGATTGGCGCGACATCGCGCGCACGTTGCGCTTGAAG GACTGCGCACTGTGACAGTG
Downstream 100 bases:
>100_bases CCCGTAAGTAACTGCGGCCTGACCGATTCAGCACCAACGCGAAGCGGCGTTGCGATCTTTATAAAAGATAACTTCGTCAC ACTATGGATGTGATTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Purple Acid Phosphatase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Phosphohydrolase; Phosphatase; LPXTG-Motif Cell Wall Anchor Domain Protein; Ser/Thr Phosphatase Family Protein; Collagen Triple Helix Repeat Protein; Calcineurin-Like Phosphoesterase; Metallophosphoesterase Domain-Containing Protein; PA14 Domain Protein; Alpha-1 2-Mannosidase Family Protein; N-Acetylmuramoyl-L-Alanine Amidase; Ser/Thr Protein Phosphatase Family Protein Family
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MQQSLKQHSLRAVLALLALACVPAVAADKAAEPNTQVPLGSTHYVADGFPDRIVATPAQDAARGFAVAWRTDASVTAPWL ELVVAGDSPDVGTPRRIQATTATLSSENGASHHHRADIDGLTPDTLYAYRVQGHGTWGAWNHFRTAATPGTPLTLLYFGD TQNKNLSLVSRLIRQAWRSAPEARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEDAEDTPQAT RTLGGHWPVTFALPRNGPAATARTSYWFDYQGVRIAVLDGTSALDLGTGQAQAQWLDGVLADNPHPWSIVLIHQPFFSPR ADRENQKLVEQVLPVIRRHKVDLVLQGHDHTYGRRGDDGGQPTPVFVVSVAGPKQYRLSDMARKTMRPVGEDTQLYQVLR IDQQKLVYESRTATGRLYDAFELQRRADGSKQLIEHEAGRIAPRDCPRSATLKGRADRCWE
Sequences:
>Translated_461_residues MQQSLKQHSLRAVLALLALACVPAVAADKAAEPNTQVPLGSTHYVADGFPDRIVATPAQDAARGFAVAWRTDASVTAPWL ELVVAGDSPDVGTPRRIQATTATLSSENGASHHHRADIDGLTPDTLYAYRVQGHGTWGAWNHFRTAATPGTPLTLLYFGD TQNKNLSLVSRLIRQAWRSAPEARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEDAEDTPQAT RTLGGHWPVTFALPRNGPAATARTSYWFDYQGVRIAVLDGTSALDLGTGQAQAQWLDGVLADNPHPWSIVLIHQPFFSPR ADRENQKLVEQVLPVIRRHKVDLVLQGHDHTYGRRGDDGGQPTPVFVVSVAGPKQYRLSDMARKTMRPVGEDTQLYQVLR IDQQKLVYESRTATGRLYDAFELQRRADGSKQLIEHEAGRIAPRDCPRSATLKGRADRCWE >Mature_461_residues MQQSLKQHSLRAVLALLALACVPAVAADKAAEPNTQVPLGSTHYVADGFPDRIVATPAQDAARGFAVAWRTDASVTAPWL ELVVAGDSPDVGTPRRIQATTATLSSENGASHHHRADIDGLTPDTLYAYRVQGHGTWGAWNHFRTAATPGTPLTLLYFGD TQNKNLSLVSRLIRQAWRSAPEARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEDAEDTPQAT RTLGGHWPVTFALPRNGPAATARTSYWFDYQGVRIAVLDGTSALDLGTGQAQAQWLDGVLADNPHPWSIVLIHQPFFSPR ADRENQKLVEQVLPVIRRHKVDLVLQGHDHTYGRRGDDGGQPTPVFVVSVAGPKQYRLSDMARKTMRPVGEDTQLYQVLR IDQQKLVYESRTATGRLYDAFELQRRADGSKQLIEHEAGRIAPRDCPRSATLKGRADRCWE
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32566472, Length=354, Percent_Identity=23.4463276836158, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50714; Mature: 50714
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSLKQHSLRAVLALLALACVPAVAADKAAEPNTQVPLGSTHYVADGFPDRIVATPAQD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEECCCHH AARGFAVAWRTDASVTAPWLELVVAGDSPDVGTPRRIQATTATLSSENGASHHHRADIDG HHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC LTPDTLYAYRVQGHGTWGAWNHFRTAATPGTPLTLLYFGDTQNKNLSLVSRLIRQAWRSA CCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC PEARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEDAEDTPQAT CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCCHHH RTLGGHWPVTFALPRNGPAATARTSYWFDYQGVRIAVLDGTSALDLGTGQAQAQWLDGVL HHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCEEECCCCCHHHHHHCCHH ADNPHPWSIVLIHQPFFSPRADRENQKLVEQVLPVIRRHKVDLVLQGHDHTYGRRGDDGG CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC QPTPVFVVSVAGPKQYRLSDMARKTMRPVGEDTQLYQVLRIDQQKLVYESRTATGRLYDA CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH FELQRRADGSKQLIEHEAGRIAPRDCPRSATLKGRADRCWE HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQQSLKQHSLRAVLALLALACVPAVAADKAAEPNTQVPLGSTHYVADGFPDRIVATPAQD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEECCCHH AARGFAVAWRTDASVTAPWLELVVAGDSPDVGTPRRIQATTATLSSENGASHHHRADIDG HHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC LTPDTLYAYRVQGHGTWGAWNHFRTAATPGTPLTLLYFGDTQNKNLSLVSRLIRQAWRSA CCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC PEARLALFAGDLVSGKDGQDDNEWAEWFEAGRWLLEGTAVAPAPGNHEYHEDAEDTPQAT CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCCHHH RTLGGHWPVTFALPRNGPAATARTSYWFDYQGVRIAVLDGTSALDLGTGQAQAQWLDGVL HHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCEEECCCCCHHHHHHCCHH ADNPHPWSIVLIHQPFFSPRADRENQKLVEQVLPVIRRHKVDLVLQGHDHTYGRRGDDGG CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC QPTPVFVVSVAGPKQYRLSDMARKTMRPVGEDTQLYQVLRIDQQKLVYESRTATGRLYDA CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH FELQRRADGSKQLIEHEAGRIAPRDCPRSATLKGRADRCWE HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA